Agrobacterium fabrum: Atu4473
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Entry
Atu4473 CDS
T00070
Symbol
lysS
Name
(GenBank) lysyl-tRNA synthetase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
atu
Agrobacterium fabrum
Pathway
atu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
atu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Atu4473 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
atu01007
]
Atu4473 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
atu03016
]
Atu4473 (lysS)
Enzymes [BR:
atu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
Atu4473 (lysS)
Amino acid related enzymes [BR:
atu01007
]
Aminoacyl-tRNA synthetase
Class II (A)
Atu4473 (lysS)
Transfer RNA biogenesis [BR:
atu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Atu4473 (lysS)
Prokaryotic type
Other AARSs
Atu4473 (lysS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
AAK88969
UniProt:
Q8U7H6
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All DBs
Position
linear:complement(1614827..1616326)
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AA seq
499 aa
AA seq
DB search
MTDTKTETTALSSDATEVRRQKLALLREQIGDVYPAHFHRTLSNAELAEKYADIEADVET
GDTVTVAGRVYSSRNSGMFMDIHDASGKVQIFSHKDTTPEAARNLLPMIDIGDIIGVTGK
VRRTKRGELTINAEEITMLTKSLLPMPEKWHGVSDIELRYRKRHLDILANEDSKLRFLQR
SKILSGIRRFMEAEGFLEVETPMLQTVYGGATADPFKTFHNTLKMDMYLRIAPELFLKRT
LVSGLSDKVFEINRNFRNEGVSTRHNPEFTMMECYWAYADYEDIMGLVERLFETLAIALH
GTTEVEFQGQTISFKGPFKRVPMPDAVKEATGIDFLAIKTDEEARAAAKAAGFAVEKDWT
WGECLAFIFEEKVEATLIQPSHVTHFPKDISPFAKEVPGEPRLVERFESYCNAWEVGNAF
SELNDPEEQRRRMVEQLEQAHARGEKDKQLDDEFLDAIDQGMPPAGGLGIGVDRLIMLLT
NAPSIRDVILFPARRNKAD
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacaccaagaccgaaaccaccgccctctcctccgacgcgacagaagtgcgccgc
cagaaacttgcgctgctgcgcgagcagatcggcgacgtctatccggcgcatttccaccgc
acgctgagcaatgccgagcttgcggaaaaatatgccgatatcgaagccgacgttgagacc
ggcgatacggtgacggtggcgggtcgcgtttattcctcgcgcaattccggcatgttcatg
gatatccatgacgcctcgggcaaggtgcagatcttctcccacaaggatacgacaccggaa
gcggcgcgcaacctgctgccgatgatcgatattggcgacatcatcggcgtgaccggcaag
gtgcgccgcaccaagcgtggcgagctgacgatcaacgccgaagaaatcaccatgctgacc
aagtcgctgctgcccatgccggaaaagtggcatggcgtctccgacatcgagctgcgttac
cgcaagcgccatctcgatattctggcgaacgaagactccaagctgcgcttcctgcaacgc
tcgaaaatcctctccggtatccgccgtttcatggaggccgaaggcttcctcgaagtggaa
acgccgatgctgcagaccgtttatggcggtgcgacggccgatccgttcaagaccttccac
aacacgctgaagatggacatgtatctgcgcatcgcgccggaattgttcctgaagcgcacg
ctggtatcaggcctttccgacaaggtgttcgaaatcaaccgcaacttccgcaacgaaggc
gtctccacaaggcacaatcctgaattcaccatgatggagtgctactgggcctatgccgat
tacgaagacatcatgggtctcgtggagcggctgttcgagacgctggcgattgctctgcac
ggcacgaccgaagtggaattccagggccagacgatctccttcaagggtccgttcaagcgc
gtgccgatgcctgatgccgtgaaggaagcgaccggcatcgatttcctcgccatcaagacc
gacgaagaggcccgcgctgccgccaaggccgccggttttgccgtcgagaaggactggacc
tggggcgaatgccttgccttcatcttcgaagagaaggtggaagccacgctgatccagccg
agccacgtcacgcattttccgaaggacatctcgccgtttgccaaggaagtgccgggcgaa
ccgcgcctcgtcgagcgtttcgagagctattgcaacgcctgggaagtgggcaacgccttc
tcggaactcaacgatcccgaagaacagcgccgccgcatggtggaacagctggaacaggcg
cacgcccgcggcgagaaggacaagcagctggacgacgagttcctcgacgccatcgaccag
ggcatgccacccgccggcggcctcggcatcggtgtcgatcgcctgatcatgctcttgacc
aacgccccgtcgatccgcgacgtgatcctcttcccggcccgccgcaacaaggcggattga
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