Agrobacterium fabrum: Atu4619
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Entry
Atu4619 CDS
T00070
Symbol
uvrD
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
atu
Agrobacterium fabrum
Pathway
atu03420
Nucleotide excision repair
atu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
atu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Atu4619 (uvrD)
03430 Mismatch repair
Atu4619 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atu03400
]
Atu4619 (uvrD)
Enzymes [BR:
atu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Atu4619 (uvrD)
DNA repair and recombination proteins [BR:
atu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Atu4619 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
Atu4619 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
AAA_12
HHH_5
HHH
HHH_3
Motif
Other DBs
NCBI-ProteinID:
AAK88828
UniProt:
Q7CVE9
LinkDB
All DBs
Position
linear:complement(1765840..1767906)
Genome browser
AA seq
688 aa
AA seq
DB search
MAVAYLDKLNEQQRKAVEHGVGLADGETAGPLLIIAGAGSGKTNTLAHRVAHLIVNGADP
RRILLMTFSRRAASEMSRRVERICKQVIGANSAIMTDALAWSGTFHGIGARLLRIYAEQI
GLNIDFTIHDREDSADLMNLVRHELGFSKTESRFPTKGTCLAIYSRAVNSQTPLKDILRQ
HYPWVADWQSELKELFAAYVEAKQIQNVLDYDDLLLYWAQMVSDPILADDIGNRFDHVMV
DEYQDTNRLQASVLMAMKPGGRGLTVVGDDAQSIYSFRAATVRNILDFPACFNPAADIIT
LDRNYRSTQPILAAANGVIDLARERFTKNLWTERQSLERPKLVTVKDETEQANFIIDQIL
ANRETGTTLKQQAVLFRTSSHSGPLEVELTRRNIPFVKFGGLKFLDSAHVKDMLAVLRFA
QNPRDRVAGFRLLQMLPGIGPKKAGNILDTIAPDPEPLLALAEIPPPPKTGDDWTAFTQL
LVGLRRGPNGWPGEIGLARLWYEPHLERIHEDADTRKADLQQLEQIAGGYPSRERFLTEL
TLDPPDATSDQAGVPLLDEDYLSLSTIHSAKGQEWRSVFILNVVDGCIPSDLGVGTSQEL
EEERRLLYVAMTRAKDNLSLITPQRFFTGGQSSQGDRHVYAARTRFIPATLLQFFETMSW
PLVSIAASERSAQQIRIDVGARMRAMWK
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggcggttgcctatctggacaagttgaacgagcagcagcgcaaggcggtggaacacggt
gtcggcctggcggatggagagacggccggtccgctgctgatcattgccggcgccggttcc
ggcaagaccaatacgctcgcccaccgcgtcgcccatctgatcgtgaatggcgccgatccc
cgccgcattctgctgatgacgttttcgcggcgggctgcctccgaaatgtcgcggcgtgtc
gagcggatctgcaagcaggttatcggggcaaattcggcaatcatgaccgatgcactggcc
tggtcaggcacgtttcacggtatcggcgcacgcctgttgcgcatctatgccgaacagatc
gggctcaatatcgatttcaccatccacgaccgcgaggacagcgccgacctgatgaacctt
gtccggcacgaactcggtttttccaagacagaaagccgctttccaacgaaggggacatgc
cttgcgatctattcgcgcgccgtgaattcccagacgccgttaaaagacattcttcgccaa
cactatccatgggtcgccgactggcagagcgaactgaaggaactgtttgcagcctatgtc
gaggccaagcagatccagaacgtgctcgattacgacgatctcctgctctactgggcgcag
atggtcagcgatcccattctggctgatgatatcggcaaccgtttcgaccatgtgatggtg
gatgaatatcaggataccaaccggctgcaggcctcggtgctgatggcaatgaaacccggt
ggccgcggcctgaccgtggtgggcgacgatgcgcagtcgatctattcgttccgggccgcg
acggtgcgcaacatcctcgattttccggcgtgcttcaacccggcggccgatatcatcacg
ctggatcgcaactatcgctcgacgcagcctattctggccgccgccaatggcgtcatcgac
ctggcgcgtgaacgttttaccaagaacctgtggacagagcggcagtcgctcgagcgcccg
aagctcgtgacggtgaaggatgaaaccgaacaggcgaatttcatcatcgaccagattctt
gccaatcgcgaaaccggcacgacgctgaaacagcaggccgtgctgttccgcacctctagc
cacagcggcccgctcgaagttgaactcacccgccgcaatatccccttcgtcaaattcggc
ggcctgaaattcctcgacagcgcccatgtaaaggacatgctggcggtgctccgtttcgcc
cagaacccgcgcgaccgcgtcgccggtttccggctgctgcagatgctgccaggcatcggg
ccgaagaaggccggcaatatcctcgatacgatagccccggacccggagcccctgcttgcc
cttgccgaaattccaccgccgccgaagaccggtgacgactggacggctttcacgcaattg
ctagtggggctgcggcggggcccgaacggctggccgggcgaaatcggcttggcgcgcctg
tggtacgagccccatctcgaacgcatccatgaggatgccgacacccgcaaggccgatctg
cagcaactcgagcagatcgccggcggctatccttcacgcgagcgttttctgaccgagctg
acgcttgacccgccggacgccaccagcgatcaggccggcgtcccgcttctcgacgaagac
tatctcagcctctctaccatccattcggccaagggccaggaatggcgttccgtgttcatc
ctcaacgtggtcgatggctgtataccctccgacctcggggtcggcaccagccaggaactg
gaggaagagcgccggctactctacgtcgccatgacccgcgccaaggacaacctgtcgctg
atcaccccgcaacgtttcttcactggtgggcagagttctcagggcgaccggcatgtctac
gctgccagaacccgcttcataccggcgacattgctgcagttttttgagacgatgagctgg
ccgttggtttcgattgcagcttcggagcggagcgctcagcagatccggattgatgtgggg
gcaaggatgcgggcgatgtggaagtaa
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