Agrobacterium fabrum: Atu4741
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Entry
Atu4741 CDS
T00070
Symbol
acoR
Name
(GenBank) transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
atu
Agrobacterium fabrum
Brite
KEGG Orthology (KO) [BR:
atu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
atu03000
]
Atu4741 (acoR)
Transcription factors [BR:
atu03000
]
Prokaryotic type
Helix-turn-helix
Other families
Atu4741 (acoR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
HTH_30
RWP-RK
HTH_1
HTH_AsnC-type
PAS
HTH_Tnp_ISL3
AAA
HTH_24
HTH_50
HTH_23
HTH_17
AAA_2
HTH_IclR
HTH_20
IclR_C
HTH_28
HTH_29
AAA_16
HTH_psq
TsaE
Torsin
Motif
Other DBs
NCBI-ProteinID:
AAK88709
UniProt:
A9CH23
LinkDB
All DBs
Position
linear:complement(1909460..1911343)
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AA seq
627 aa
AA seq
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MGFSDHIKEIETVGQGRNTGRDAVVLESWRRCLDTYQLDPTKAREAVIVSETRLREHRQQ
AEDLLHIARSGLERLYRQVAEQNYVLLLSDRQGVTVEFLGDPSFNNNLRKAGLYLGSEWS
EPRAGTCAVGACIATGESLTIHQTDHFDVTHTPLSCTAAPIYDTQGALTAVLDISLLSSP
ILKTSQNMARHLVSSTVRRIELANLMASSRHDLVLRFAGAPEFLDVDPEAALSVDGSGRI
TGMTHAAARLLAASRGLDWRMPERLLGQRVEEFFEAGLDELASLTRSSLPQDRRIVVRDG
TVLYAHAIEPQQRRSSVPLARSKPQPVTERIGGDGPAVRNLRRKVEKLSPARLPILLQGQ
TGTGKEHLARIIHDASGVSGRFVAVNCAAIPEQLIESELFGYLPGAFTGALAKGRKGLVE
EAQGGTLFLDEIGDMPFAAQSRLLRVLAEGEVLPVGGSTPQKVDFRVISASHRPLNDMVR
TGAFREDLYYRLNAAVLTLPALSERDDFPWLLDRILEKHGMPGRPLTLSNAARLTILHHR
WPGNIRELDNAIAFAAALCDDGLITVEDLPEQLTPASSTPMIDSRGTDLRALLAACNGNI
SEAARRLGVDRTTLHRRMRRLGIGKPH
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgggtttttcggatcatatcaaggaaatcgagaccgtcggccagggcagaaataccggc
cgggatgcggtggtgctggaatcctggcggcgttgcctcgacacctaccagcttgatccg
acgaaggcgcgtgaagcggtcatcgtctccgagacacgtcttcgcgagcatcgccagcag
gcggaagacctcttgcacatcgcccgctccggcctggagcggctttaccggcaggtggcg
gagcagaattacgtcctcctcctttccgatcggcagggcgtgacggtggagttcctgggc
gatccctccttcaacaacaatctgcgcaaggctgggctttatcttggctcggaatggtct
gaaccccgcgccggcacctgcgccgtcggcgcctgcatcgcaaccggtgaatcactcacc
atccaccagaccgatcatttcgacgtgacgcacacgccgctttcctgcaccgcagcaccg
atctacgatacgcagggtgcactgaccgccgtgctggatatttcactgctcagttcaccg
atcctgaagacgagccagaacatggcccgccatctggtctcttccaccgtgcggaggatc
gagcttgccaatctgatggccagcagccggcatgacctcgttctgcgctttgcaggcgcg
cccgaatttctggatgtcgacccggaagcggccctgtcggtcgacggttccggccgcatc
acgggcatgacgcacgccgccgcccgccttctcgccgcatcgcgggggctcgactggcgc
atgcccgagcgtcttctcggacagcgggtggaggagtttttcgaagccggtttggatgag
cttgcctccctcacccgctccagcctgccgcaggacaggcgcatcgtcgttagagacggg
accgtgctttatgcgcacgcgatcgaaccgcagcagcgcaggtcgagcgttccgcttgcc
cgctcgaaaccgcagccggtaacggagaggatcggcggtgacggcccggcggttcgaaat
ctcaggcggaaagtggagaaactctcgcctgcaagactgccgatcctgctgcagggccag
accggcaccggcaaggaacatctcgcccgcatcattcacgatgccagcggcgtttccggc
cgcttcgtcgccgtcaattgcgctgccattcccgaacagctgatcgaaagtgaactgttc
ggttatctgccgggcgccttcaccggtgccttggcgaaagggcgcaaagggctggtggaa
gaggcgcagggtggaacgcttttccttgacgaaatcggtgacatgccgtttgcggcgcaa
agccggcttttgcgcgttctggcggaaggcgaggttctgccggtcggtggttccaccccg
cagaaggtggatttcagggtgatttcggcatctcaccgtcccctgaacgacatggtgcga
acaggtgcattccgcgaagatctctattaccggctgaacgcggcggtcctgacgctgccg
gcactcagcgagcgcgacgattttccgtggcttctcgacaggatactcgaaaaacacggc
atgcccggacgaccgctgacgctctccaacgctgcccggctgacgatcctgcaccaccgc
tggccgggcaatatccgcgagctggacaatgcgatcgcctttgcagccgcactttgcgac
gacgggctgattacggtggaggatcttccggagcagctcacccccgcctcctccaccccc
atgatcgacagccgcggcaccgatcttcgcgcattgctggccgcctgtaacggcaatatt
tctgaagccgcccgccggctcggtgttgaccgcacgaccctccatcgccgcatgcggcgc
ctcggcatcggaaaacctcactga
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