Agrobacterium fabrum: Atu4765
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Entry
Atu4765 CDS
T00070
Name
(GenBank) conserved hypothetical protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
atu
Agrobacterium fabrum
Brite
KEGG Orthology (KO) [BR:
atu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atu03400
]
Atu4765
Enzymes [BR:
atu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
Atu4765
DNA repair and recombination proteins [BR:
atu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
Atu4765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
AAK88685
UniProt:
A9CH39
Structure
PDB
PDBj
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All DBs
Position
linear:1934620..1936143
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AA seq
507 aa
AA seq
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MSQLVLILGDQLSPSIAALDGVDKKQDTIVLCEVMAEASYVGHHKKKIAFIFSAMRHFAE
ELRGEGYRVRYTRIDDADNAGSFTGEVKRAIDDLTPSRICVTEPGEWRVRSEMDGFAGAF
GIQVDIRSDRRFLSSHGEFRNWAAGRKSLTMEYFYREMRRKTGLLMNGEQPVGGRWNFDA
ENRQPARPDLLRPKHPVFAPDKITKEVIDTVERLFPDNFGKLENFGFAVTRTDAERALSA
FIDDFLCNFGATQDAMLQDDPNLNHSLLSFYINCGLLDALDVCKAAERAYHEGGAPLNAV
EGFIRQIIGWREYMRGIYWLAGPDYVDSNFFENDRSLPVFYWTGKTHMNCMAKVITETIE
NAYAHHIQRLMITGNFALLAGIDPKAVHRWYLEVYADAYEWVELPNVIGMSQFADGGFLG
TKPYAASGNYINRMSDYCDTCRYDPKERLGDNACPFNALYWDFLARNREKLKSNHRLAQP
YATWARMSEDVRHDLRAKAAAFLRKLD
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
gtgtctcagctggtgttgatcctgggcgatcaattgtcgccttcaatcgccgcgctcgat
ggcgtcgacaagaagcaggatacaatcgtgctttgcgaggtgatggcggaggcaagctat
gtcggccatcacaagaaaaagatcgccttcatcttttccgccatgcgccactttgccgag
gaattgcgaggcgagggctaccgggtccgttacacgcgaattgacgatgccgacaatgcg
ggctcgtttaccggtgaggtgaagcgggcaatagatgacctcacgccttcgaggatctgc
gtgaccgaacccggggaatggcgggtcaggtcagagatggatggctttgccggagccttt
ggcatccaggtggacatccgctccgaccggcgcttcctgtccagtcacggcgagttccgg
aactgggctgcgggccgaaaaagcctgacgatggaatatttctacagggaaatgcgacgc
aagaccggcttgttgatgaatggtgagcagcctgtcggcgggcgctggaattttgatgcg
gagaaccgccaacccgcgaggccggatcttttgagacctaaacatcctgtctttgcgccg
gacaagataacaaaagaggtcatcgacaccgtcgagcgactgtttccggacaatttcggc
aaacttgaaaatttcggttttgcggtcacccgcaccgatgcagagcgggcgctgagtgcc
ttcatcgacgatttcctgtgcaacttcggcgccacgcaggatgccatgctgcaggatgac
cccaacctgaaccactcgcttctgtcattttatatcaattgcggcctgctggacgccctt
gatgtctgcaaggctgcggagcgggcctatcatgaaggcggagcgccgctcaatgccgtc
gaagggttcattcgtcagatcatcggctggcgggaatatatgcgtggcatctattggctt
gccgggccggactatgtcgacagcaattttttcgaaaacgacagatcgcttccggttttc
tactggacgggcaagacccacatgaactgcatggctaaggttatcacggaaaccatcgag
aatgcctatgcccatcacatccagcgcctgatgataacaggaaatttcgcgctgctcgcc
ggcatcgatccaaaggcggtgcatcggtggtatctcgaggtctatgcggacgcctatgaa
tgggtggaactgcccaatgtgatcggcatgagccagttcgccgatggcggctttcttgga
acgaagccgtatgcagccagcggaaattacatcaaccggatgtccgattattgcgatacc
tgtcgctacgatccgaaggagcgtctgggagacaatgcctgtccgttcaatgcactttat
tgggacttcctcgcccgcaacagggaaaagctgaaatccaaccatcgcctagcgcaaccc
tacgccacctgggccaggatgagcgaggatgtgcgccatgacctgagggcaaaggctgcc
gcttttctgcgaaagcttgactga
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