Agrobacterium fabrum: Atu4848
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Entry
Atu4848 CDS
T00070
Symbol
deoC
Name
(GenBank) 2-deoxyribose-5-phosphate aldolase
KO
K01619
deoxyribose-phosphate aldolase [EC:
4.1.2.4
]
Organism
atu
Agrobacterium fabrum
Pathway
atu00030
Pentose phosphate pathway
atu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
atu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
Atu4848 (deoC)
Enzymes [BR:
atu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.4 deoxyribose-phosphate aldolase
Atu4848 (deoC)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoC
GH3_N_vert
Motif
Other DBs
NCBI-ProteinID:
AAK88601
UniProt:
Q7CW11
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All DBs
Position
linear:2028370..2029329
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AA seq
319 aa
AA seq
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MSEAFPRNNGTALKPEWFDDVSVNRSASERRAATITTRRSVKKEYQVAWQIKAITCIDLT
TLSGDDTPGRVRRLCAKARRPVREDILETLGLADAGITTGAVCVYPTMVPHAVKALEGTA
IPVASVATGFPSGLTPLPQRLAEIRYAVEQGAKEIDIVITREFVLTQNWTALYDEISAMR
EACGDAHMKAILATGDLNTLTNVYRASMVAMQAGSDFIKTSTGKEEVNATLPVSLTMVRA
LRDYGELTGQMVGFKPAGGLKTAKDAVSWLTLMKEELGNRWLEPDLFRIGASSMLGDIER
QLEHFVTGRYSSAHHHAAA
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagcatttcccagaaataacggcaccgctctcaaaccggaatggttcgacgat
gtgtcggtcaatcgcagcgcttccgaacggcgtgcagcgacgatcaccacccggcgctcg
gtcaagaaggaataccaggtcgcctggcagatcaaggccatcacctgcatcgatctgacg
acgctgtccggcgacgacacccccggtcgcgtgcgccgcctgtgcgcgaaagcgcgccgt
ccggtccgggaagatatcctcgagacactcggccttgcggatgccggcatcaccaccggc
gccgtctgcgtttacccgaccatggtgccccacgccgtcaaggcgttggaaggcacggca
attccggtcgcatcggtggcgacgggctttccctccggcctgaccccgctgccgcaacgg
cttgccgaaattcgatatgccgtcgagcaaggcgccaaggagatcgatatcgtcataacc
cgcgagttcgttctgacgcagaactggacagcactttacgacgagatttccgcgatgcgt
gaagcctgcggcgacgcccatatgaaggctatcctggcgacgggcgatctcaacaccctg
actaacgtctatcgtgcctcgatggtggccatgcaggcgggctcggacttcatcaagacg
tcgactggcaaagaagaggtcaacgccaccctgccggtcagtctgaccatggttcgggca
ctgcgcgattacggcgaactgaccggccagatggtcggcttcaagcctgcaggcggattg
aagacggcaaaggacgcggtgtcatggctgacgctgatgaaggaggagctgggcaatcgc
tggctggagccggacctgttccgcatcggcgccagctcgatgctcggcgatattgagcgg
cagctcgaacatttcgtaaccggccgctattcaagcgctcaccaccacgctgccgcataa
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