Agrobacterium fabrum: Atu5005
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Entry
Atu5005 CDS
T00070
Symbol
socB
Name
(GenBank) Deoxyfructosyl-amino acid ABC-type Membrane Transporter
KO
K02028
polar amino acid transport system ATP-binding protein [EC:
7.4.2.1
]
K02029
polar amino acid transport system permease protein
Organism
atu
Agrobacterium fabrum
Brite
KEGG Orthology (KO) [BR:
atu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
atu02000
]
Atu5005 (socB)
Enzymes [BR:
atu01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.1 ABC-type polar-amino-acid transporter
Atu5005 (socB)
Transporters [BR:
atu02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Putative polar amino acid transporter
Atu5005 (socB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
BPD_transp_1
AAA_21
SMC_N
ABC_ATPase
AAA_29
AAA_22
AAA_23
AAA_5
AAA_30
AAA_16
AAA_18
AAA_15
RsgA_GTPase
AAA_33
AAA_28
NACHT
nSTAND1
ORC-CDC6-like
Adeno_IVa2
Motif
Other DBs
NCBI-ProteinID:
AAK90385
UniProt:
Q7D448
LinkDB
All DBs
Position
At:complement(6352..7860)
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AA seq
502 aa
AA seq
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MNWLENLRRSFLDWNAMAEVLPTMITVGLKNTLILAATSTVLGVAIGMMLAIMGISRSPW
LRIPARLYTDIFRGLPAIVTILLIGQGFARIGRELFGPSPYPLGILALSLIAGAYIGEIF
RSGIQSVDRGQMEACRALSMSYGQGMRLIVVPQGVRRVLPALVNQFIGNVKDSSLVYFLG
LLASEREIFRVGQDQAVVTGNLSPLLLAGVFYLIVTVPLTHVVNAIDNRLRIGKQRPSVI
TSGLEEVSELDGAARASGVAFKGGSLDVRRLGMAYGDLDVLKGVDLSVKPGSVTCIIGPS
GSGKSTLLRGLNRLVEPKSGDILIDGESILAMKPETLRRRVGMVFQHFNLFPDHTALENV
MLSLKKIKGLPAAEAERIAKAGLADVGLASRQHHRPGGLSGGQQQRVAIARALAMEPEVI
LFDEVTSALDPELVKGVLNLMAELGTRGMTMVVVTHEMGFARRVADQVVFMDEGRVVEAG
TPEAIFDNPQSPRLQRFLAEVL
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgaactggcttgaaaacctgcgccgcagcttcctcgactggaatgccatggccgaagtg
ctgccgaccatgatcacggtcggactgaagaatacgctgattctggctgcgacctcgacg
gtgcttggcgtcgccatcggcatgatgctcgccatcatgggtatttcccgctcgccatgg
ctgcgcattcccgcgcgcctttataccgatattttccgcggcctgccggccatcgtcaca
atcctcctgatcggccagggttttgcccgcatcggccgcgagctcttcggtccgtcgcct
tatccgctcggcattctggcgctcagcctgatcgctggcgcttatatcggcgagattttc
cgctccggtattcagagcgttgaccgcggccagatggaggcctgccgggcgctctcgatg
agctacggtcagggcatgcgccttatcgtcgtgccgcagggtgtgcgccgtgtgctgccg
gctctcgtcaaccagttcatcggcaacgtgaaggattcgagccttgtctatttcctcggg
cttctggcctccgagcgcgagattttccgcgtggggcaggaccaggcggtggtgacgggc
aatctttcgccgctgctgctcgcgggcgtattttatctcatcgtcaccgtaccgctcacc
catgtcgtcaatgcgatcgacaatcgcttgcggatcggcaagcagcgtccatccgtcatc
accagtgggctggaggaagtcagtgaactcgacggtgcagcccgcgcgtccggtgtcgcc
ttcaagggtggcagcctcgatgtgcgccgtctcggcatggcgtatggcgatctcgatgtg
ctgaagggtgtcgacctttcggtaaagccgggcagcgtcacctgcatcatcggcccgtcc
ggttcaggcaaatccaccctgctgcgcggacttaaccgtctggtcgagccgaagagcggc
gatattctcatcgatggtgaaagcattctggccatgaaaccggaaacgctgcgccgccgg
gtcggtatggtcttccagcatttcaatctctttccggatcacacggcgctggaaaacgtc
atgctgtcgctgaagaagatcaagggcctgcctgcagccgaggccgagcgcattgccaag
gcagggcttgccgacgttggtcttgcgagccgtcagcatcaccgtccgggcggtctttcc
ggtgggcagcaacagcgcgtcgccatagcccgtgcgcttgccatggagccggaagttatc
ctcttcgatgaggtgacgagtgcgctcgatccggaattggtcaagggcgtgctcaacctg
atggccgaactcggcacgcgtggcatgaccatggtcgtcgtgacgcatgaaatgggattt
gcccgccgggtcgccgatcaggtcgtcttcatggatgaggggcgcgtggtggaagccggc
acgccagaggcgatattcgataacccgcaaagcccgcgcctccagcgcttccttgcggaa
gtgctctga
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