Agrobacterium fabrum: Atu5006
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Entry
Atu5006 CDS
T00070
Symbol
socA
Name
(GenBank) Deoxyfructosyl-amino Acid Transporter Periplasmic Binding Protein
KO
K02030
polar amino acid transport system substrate-binding protein
Organism
atu
Agrobacterium fabrum
Brite
KEGG Orthology (KO) [BR:
atu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
atu02000
]
Atu5006 (socA)
Transporters [BR:
atu02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Putative polar amino acid transporter
Atu5006 (socA)
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GFIT
Motif
Pfam:
SBP_bac_3
Lig_chan-Glu_bd
Phosphonate-bd
NMT1
Motif
Other DBs
NCBI-ProteinID:
AAK90386
UniProt:
Q7D447
Structure
PDB
PDBj
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All DBs
Position
At:complement(7921..8754)
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AA seq
277 aa
AA seq
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MRFTEAFTSPFAKIRATAIAVTLGVLAGAATPALADNPLGLIDPTTISVGTMGDAKPYAF
TTADGNFTGFDIELFLNVAGRLGFKKEQVVFTGQEFSALMPSVANGRFDVAAAAIGTTAK
RKETVDFSDGYLAGFLSVLTSEAGITDAAGLKGKRLGVVQGTLQEIYAEKNFAGTDLVKF
PDNNSAVSALNNGTVDAHFLDFEAAKDYSARYPALKIAVNIPSFDAPAGFVIRKGNDALR
NALDKGLKEAMQDGTWKKLHEKWFPGTPMPAAYLPKQ
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgcgatttaccgaagccttcacttccccctttgccaaaatccgcgccactgccatcgcg
gtcacgcttggtgtccttgcaggcgcagcgaccccggcgcttgcagacaatccgcttggc
ctcatcgatcccaccaccatcagtgtcggcacgatgggtgacgccaagccctatgccttt
accactgccgacggcaactttaccggtttcgacatcgagcttttcctcaacgtcgcaggg
cgtcttggcttcaagaaggagcaggtggtcttcaccggtcaggagttctcggcgttgatg
ccctcggtcgctaacggccgcttcgatgttgcggctgccgcaattggcacgacggccaag
cgcaaggagaccgttgatttctccgatggttatcttgcaggcttcctcagcgtgctgact
tcggaggctggcatcaccgatgccgcaggcctcaagggcaagcgtctcggcgtcgtgcag
ggcacgctgcaggaaatctatgccgagaagaacttcgccggcaccgatctcgtcaagttc
ccggacaataactcagccgtttctgcgctcaacaacggcacggtcgacgcccatttcctc
gatttcgaggcggcaaaagactactccgcccgctatccggcgctgaagattgcagtcaac
attccaagcttcgatgcgcctgccggcttcgtcatccgcaaggggaacgatgcattgcgc
aacgcactggacaagggcctgaaagaggccatgcaggacggcacctggaagaagcttcat
gaaaaatggttccccggcacaccgatgccggcggcatatcttcccaagcagtga
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