KEGG   Agrobacterium fabrum: Atu5049
Entry
Atu5049           CDS       T00070                                 
Name
(GenBank) conserved hypothetical protein
  KO
K10979  DNA end-binding protein Ku
Organism
atu  Agrobacterium fabrum
Pathway
atu03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:atu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    Atu5049
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:atu03400]
    Atu5049
DNA repair and recombination proteins [BR:atu03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     Atu5049
SSDB
Motif
Pfam: Ku
Other DBs
NCBI-ProteinID: AAK90424
UniProt: Q7D415
LinkDB
Position
At:48390..49286
AA seq 298 aa
MVAPRANWKGFIKYGEVACPVALYTAASSSERIAFNTLNRKTGNRVKREFVDSETGDPVE
RDEQVKGYEVENGQYIILEPEEVAAAVPDSDKTLKIDAFIPCHEIDDVYFDKPYYLAPDK
MGTDAFLLLRDGMKKAKVAAIARTVLFRRVRTVLIRPHGKGLIATTLNFDYEVRSSQEAF
EELPDLKIEGEMLELAEHIIGTKKGSFDASAFDDRYEAAVAELVKAKIEGRALPKKKAPP
ASKPSDLLQALRESAGVVAKAASKRTAANVNKGTSRQKVAKAAAAKTKSAASQTRRAG
NT seq 897 nt   +upstreamnt  +downstreamnt
atggttgccccgagagcgaattggaaaggcttcatcaaatacggagaggtcgcttgtccg
gtggcgctgtacaccgcagcgtcatcttcggaacggatcgctttcaacacgctgaaccgc
aagaccggaaaccgggtcaagcgcgagttcgttgacagcgagaccggcgatccggtcgaa
cgtgacgagcaggtcaaaggatacgaggtcgaaaacggccaatacatcatccttgagccc
gaggaggtcgcggccgcagttcctgacagcgacaagacgctcaagatcgacgccttcatc
ccctgccacgagatcgacgacgtctattttgacaagccgtactatctggcgccggacaag
atgggcacggatgcttttttgcttttgcgcgacggcatgaagaaagccaaggttgccgcg
attgcccggacggttctctttcgccgcgttcgaaccgtcctcatccgtccgcatggcaaa
gggctgatcgccacaacgctgaacttcgattacgaggtgcgctcctctcaggaggcgttc
gaggaactacccgatctgaagatcgaaggcgaaatgctcgagctcgctgagcacattatc
ggcaccaagaagggcagcttcgatgccagtgccttcgacgatcgctacgaggctgccgtt
gcggagctggtgaaggcaaagatcgaggggagggcgcttccgaagaagaaggcgccgccg
gcgtcgaagccgagcgatcttcttcaggccctgcgcgagagcgctggtgtcgttgctaag
gccgcgtcgaagcgaacggctgccaatgtcaataagggcacgtcgcgccagaaggtcgcc
aaggccgccgctgccaaaaccaagtctgcggcctctcagacccgccgcgccggttga

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