Agrobacterium fabrum: Atu5050
Help
Entry
Atu5050 CDS
T00070
Name
(GenBank) conserved hypothetical protein
KO
K10979
DNA end-binding protein Ku
Organism
atu
Agrobacterium fabrum
Pathway
atu03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
atu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
Atu5050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atu03400
]
Atu5050
DNA repair and recombination proteins [BR:
atu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
Atu5050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
AAK90425
UniProt:
A9CLR6
LinkDB
All DBs
Position
At:49299..50111
Genome browser
AA seq
270 aa
AA seq
DB search
MAVRPYWKGYLKLSLVTCPVQMMPATSESEKVRFHTLNRETQNRVVSHYVDSVTGKEVKD
EDEVKGYQRGENEYIILEDEELENVALDSTKTIDISTFTPRDSVEWIWLDTPYYLSPNDP
VGQEAFSVIRDAMEAQNMVGISRLVISRRERAVMLEPRGKGIVLWTLRYGDEVRDEDTYF
AGIDDEETADREMMPLVQQLIKKQTKHWDAKMVIDPVQERLLDIIAAKKKALKKSARAKP
SAPAKSTPSNVINIMDALKKSVAAENRSSK
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atggctgttcgtccctattggaaaggctatctcaagctatcgctcgtcacttgcccggtg
cagatgatgccggcgacctccgaaagcgagaaggtgcgcttccacacgctcaaccgcgag
acccagaaccgcgtggtcagccactatgtcgattcggtcaccggcaaagaggtcaaagac
gaagatgaggtcaaaggctaccagcgtggcgagaacgaatacatcatactggaggacgag
gagctggagaacgtcgcgctcgacagcaccaagacgatcgacatttcaaccttcacgccg
cgcgacagtgtggaatggatctggctcgacacgccctattatctctcgccgaacgatccg
gtcggacaggaggccttctccgtgatccgtgacgcgatggaagcacagaacatggtcggc
atttcgcggctggtaatctctcggcgcgaacgcgccgtcatgctcgagccacgcggcaag
ggtattgtcctttggaccttgcgctacggggatgaagtccgcgacgaggatacctacttt
gcaggcatcgatgatgaggagacggcggacagggaaatgatgcctttagtgcagcaactg
atcaagaagcagacgaagcattgggatgcgaagatggtcattgacccggtgcaggaacgg
ctgctcgacatcatcgccgccaagaagaaggcgctgaaaaagtcggccagggcgaaaccg
tccgcgccagcaaagtcgacgccgagcaacgtcatcaacatcatggatgctctgaaaaaa
tcggtcgccgccgagaaccggtccagcaaatga
DBGET
integrated database retrieval system
