Agrobacterium fabrum: Atu5106
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Entry
Atu5106 CDS
T00070
Symbol
hupX
Name
(GenBank) DNA binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
atu
Agrobacterium fabrum
Brite
KEGG Orthology (KO) [BR:
atu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
atu03032
]
Atu5106 (hupX)
03036 Chromosome and associated proteins [BR:
atu03036
]
Atu5106 (hupX)
03400 DNA repair and recombination proteins [BR:
atu03400
]
Atu5106 (hupX)
DNA replication proteins [BR:
atu03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Atu5106 (hupX)
Chromosome and associated proteins [BR:
atu03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Atu5106 (hupX)
DNA repair and recombination proteins [BR:
atu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Atu5106 (hupX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
Motif
Other DBs
NCBI-ProteinID:
AAK90482
UniProt:
A9CLN8
LinkDB
All DBs
Position
At:complement(112394..112624)
Genome browser
AA seq
76 aa
AA seq
DB search
MTKAQAKSIVETVFASITTAATSGAETSIPGFGKFKIKDTPEREARNPATGATIKVAAAK
KLTFQPAKALKDVLNK
NT seq
231 nt
NT seq
+upstream
nt +downstream
nt
ctgaccaaagcccaggcgaaatcgatcgtcgaaaccgtcttcgcgtcgatcacgacggca
gccacgtccggagcggaaacatctatcccgggattcggcaagttcaagatcaaggatacc
ccggagcgtgaggctcgcaatccggcaaccggcgccaccatcaaggttgccgctgcgaag
aagcttacgtttcagcctgccaaagcactgaaagatgtgctgaacaagtga
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