Agrobacterium fabrum: Atu5354
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Entry
Atu5354 CDS
T00070
Name
(GenBank) autotransporting virulence factor family member
Organism
atu
Agrobacterium fabrum
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
AC_1
Pertactin
Motif
Other DBs
NCBI-ProteinID:
AAK90728
UniProt:
Q7D3A2
LinkDB
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Position
At:complement(347092..350670)
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AA seq
1192 aa
AA seq
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MTVPAAFFEKRPSSGDGSFVDNSDTNRANNMLISGGRVGKCKGIVGGIAPCEAGLVLSFE
SLSVVSAAAFTSLLIWSSPSLAGSCDPAGPETWSCSGAATGSDPSAVIFSSAPVTVVTQP
GFGLSTSGEAIRVETIGGIAITDGNASSITSSGGQGILAINDVSGAVEITSNGSITGIDG
IYVINTGTGPTTITSSGTAIGTIGNGVYVSNDGFATDLTVSQTGGTIFGADNGISTTNRG
FGATAISVAGDVDGAAENGIWAQNFANATGITITQAVGSTITGYTHGIRADNWAAGAISI
TTAGVINQTQTGAANNDTFGVYAYNSTAGTDIILTQTAGSISGNWFGMYANNQGSGSTRI
ISSGDVTAIVRAGLYAYNAAPADSIFVSQTSGTVKGGTYGVFADNAGTGSTTVTLSGDVI
ASGDYGVYSRNASSATDLMVRQTAGSIAGRTGILASNRGTGASLVSVGSRVSGGAGAGIQ
TIAANGSTIDIASSATVTATSGIAIRDGGVAGSPIASDTIGGNVVVNSAGIVTGDAVLGL
GDDTFNLAGGTYAGNIYGDDRDDPRSNDGVTNHEGNDTFTWTGGTLAGGFYGQDGSDTAM
VSASAYDGSQVLDGGDDTSVADGMIDTLTLKGVTATTNGGKIINWEVVNLDGASLSIDDG
VWHVGEPDEATTGVFLDNRSRLDGIASLAFDGNMTIDSTSAFVGTGGGTGVYSFSGDVAN
AGTITTVDDAVGDVVIIGGNYNGNGGQILFDVALGDDNSKTDMVIINGDTSGMTNVGVNN
VGGTGAQTSEGIRIIEVNGASNGYFSLVGDYTIGDRQAVVAGAYAYQLYQGGTSSPNDGN
WYLRSQLTVSNPTPTAPLYQAGVPSYEAYPQALLGLNGVPTLQQRVGSRFWAGNGASVGT
PYATPEGAGVAIEGNGVWGRIEGVHNHIEPRFSAAAAEYDQNVFKLQAGIDGLLTETESG
KLIGGFTVHYAHGKTDTRSVWGDGEISTDGYGLGGTLTWYGENGFYLDGQAQMTWYTSGL
NSLLARTNLTDNNDGFGYTLSLESGTRIAIDPGWSVTPQAQLVYSNVDFDAFTDTFGARV
SLDRGESLQGRLGVTLDHESAWQNDKGLLNRSHVYGIGNLYYEFLEGTRVDVQGVRLASR
NDRVWAGLGLGGTYSWDDDKYSIYGEALVQTSLNDFGDSYSVKGQVGLRVKW
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtacctgcagcatttttcgagaagcgtccatctagcggggatgggtctttcgtc
gataattctgatacaaatcgagcaaataacatgctcatcagtggcggccgagtggggaag
tgtaaggggatcgtcggtggaatagcgccttgtgaagcgggtttggtactgtcgtttgaa
agtttgtccgtcgtttcggcggcggcatttacatcgttgctcatttggtcttcgccatcg
ctggcaggtagctgtgatcctgctggccctgaaacctggagctgttcgggtgctgccaca
ggcagcgatccgtcagcggttatcttttcttctgcgcccgtaacggtagtcacacaacca
ggatttggtttgtcaacctctggggaggccatcagagtcgagacgatcggagggatcgcc
ataacggacggaaatgcgtcgtccatcacgtcctctggtgggcagggtattttggcgatc
aatgatgtttccggtgcggttgaaataacatcgaacggtagcatcaccggcattgacgga
atctatgtcatcaataccggtacaggtcccacaacgatcacatcctcaggcacggcgatt
gggacaatcggtaatggtgtctatgtttccaacgacggcttcgcaacggacctgaccgtc
agtcagacgggcgggacgatttttggcgcggataacggaatttccacaaccaatcgtgga
tttggggcgaccgcaattagtgtcgccggcgatgtggacggtgcagccgaaaacggcata
tgggcgcaaaatttcgctaacgcgacaggcatcacgattacccaggcagtcggcagcacg
atcaccggttatacgcatggcatccgcgccgataattgggcggccggcgctatatcgatc
acaacagccggggtcatcaaccagacccagactggcgcggcaaataacgacacctttggt
gtctatgcctacaattccacagccgggacagatatcattcttacccagaccgcgggatcg
atctccggcaattggttcggcatgtatgccaataaccagggaagcggctcaacgaggatc
atcagttccggcgatgtcacggcaatcgtacgcgctggactttacgcttataacgcggcc
ccagcggacagtatcttcgtaagccagacatccggaacggtcaaaggcggtacctatggt
gttttcgcagacaatgcgggaaccggctcaacaacggttacactgtccggcgatgtgatc
gcctccggtgactacggtgtctattcgcgtaatgccagcagcgccaccgatctgatggtg
agacagacggcgggttctattgctggcagaaccggcattctggcgtcgaataggggtacg
ggtgcctcgctggtcagcgtcggtagtagagtgagtggcggtgcgggcgcgggtattcaa
acgattgcagcgaacggctcgaccatcgatattgcatcttcggcaacggtcacagcaacg
tcggggattgctatccgtgacggaggtgttgcgggtagcccgattgcatcggacacgatt
ggcggtaatgtcgtcgttaacagcgccggcatcgtaaccggtgacgcggtcctcggcctc
ggcgatgacaccttcaatttggctggtggaacctatgccggtaatatctacggtgacgac
agagacgaccctcgaagcaacgacggtgtcacaaaccatgaaggcaatgatacgttcaca
tggacgggcggcactctggctggcggcttctacggtcaggacggttccgatacggctatg
gtaagcgcatcggcctatgatggttctcaggtgcttgacggcggtgatgatacctcggtt
gccgatggtatgatcgatacgcttacgcttaagggtgtgacggcgacgactaatggcggc
aagatcatcaattgggaagttgtcaatctggatggagccagtctgtcgattgatgacggt
gtatggcatgtcggcgaaccggacgaagcaacgaccggtgtgttcctggacaacaggtct
agacttgacggcatagcgtcgctcgccttcgacggcaacatgacgattgattcaacctcc
gctttcgtcgggacgggcggaggaaccggggtctattcgttcagcggcgatgtggccaat
gccggaaccatcaccacggtagatgatgctgtcggcgatgttgtcatcatcggtggaaac
tataacggcaatggcggacagatactgttcgatgttgctcttggtgacgacaactccaag
acggatatggtcatcatcaatggcgacacatcgggcatgacaaatgtcggcgtcaacaat
gttggaggcacgggtgcgcagaccagtgaaggtatccgtatcatcgaagtgaacggtgct
tccaacgggtatttctcgctcgttggcgattacacaattggcgacaggcaggcggtcgtt
gcaggcgcctacgcctatcagctttatcagggaggcacttcatcaccgaatgatggcaac
tggtatttgcggtcgcaactgaccgtgtcgaatccgacgccgactgctccgctttaccag
gccggtgttccgagctatgaggcatatcctcaggcattgctgggtctgaacggcgtccca
accttgcagcaacgtgtcggtagtcgtttctgggccggtaatggcgcttctgtcggcaca
ccttatgccactcccgaaggagcaggcgttgcgatcgaaggaaacggtgtatggggtcgc
attgaaggcgtacataaccacatcgagccgcgtttctccgccgcggccgccgagtacgac
cagaatgtcttcaagcttcaggccggcattgatgggctgttgacggaaacggaaagcggc
aagctgattggcgggttcacggtccattacgcccatggcaaaaccgacaccaggtccgtt
tggggcgatggtgagatcagcacggacggttacggtcttggcgggacattgacctggtat
ggcgagaatggcttctatctggacggtcaggcccagatgacctggtacacaagcggtctc
aactctctccttgcccgcacgaacctcaccgacaacaatgacggttttggctatacactg
tcgttggaaagcggcacgcgcattgccatcgatccaggctggtccgtcacaccgcaggcc
cagctggtctattccaatgtcgacttcgacgcgtttaccgacacattcggcgcccgtgtc
agcctcgaccgtggagaaagcctgcaaggtcgtctcggtgtgaccctcgaccatgaaagc
gcgtggcagaatgacaagggcttgctcaaccgctcccacgtctacggcattggcaatctc
tactatgagttcctcgaaggcaccagggtcgatgtccagggcgtgagactcgccagccgc
aatgatcgtgtctgggccggactggggctcgggggaacctatagctgggacgacgacaag
tactcgatctatggcgaagctctggttcagaccagcctgaatgacttcggcgacagttac
tccgtcaagggacaggtgggcctacgcgtgaagtggtaa
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