Agrobacterium fabrum: Atu5410
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Entry
Atu5410 CDS
T00070
Name
(GenBank) ABC transporter, nucleotide binding/ATPase protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
atu
Agrobacterium fabrum
Pathway
atu02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
atu00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Atu5410
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
atu02000
]
Atu5410
Transporters [BR:
atu02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
Atu5410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
TOBE_2
AAA_29
SMC_N
AAA_16
nSTAND1
RsgA_GTPase
AAA_22
AAA
AAA_5
Rad17
Mg_chelatase
AAA_23
nSTAND_NTPase5
NACHT
AAA_28
PRK
AAA_25
AAA_14
bpMoxR
NB-ARC
AAA_15
ATPase_2
ORC-CDC6-like
Cytidylate_kin
Motif
Other DBs
NCBI-ProteinID:
AAK90784
UniProt:
Q7D357
LinkDB
All DBs
Position
At:405297..406412
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AA seq
371 aa
AA seq
DB search
MSQTSNAAEGKQLSVRGLTHSYGGLNAISDISFEIAAGEIVALLGPSGCGKSTVLRAIAG
LIQPKSGVIQLGGEDIANVSARARGIGMVFQNYALFPHLTVAENIAYPLACQKVGRTERR
ERIEEMLSLVQLKGFGHRLPRELSGGQQQRVAVARAIAGRPSLLLLDEPFGALDRALRFD
LQVELLHLQKTLGITTLIVTHDQEEAQSLAGRLVLMNKGNVEQIDTPMAVYDRPRSLFVN
TFIGQANVLHGTVDRVEAEATTISLANGRVLVLPRRLNFTTGSKITITCRPEDVRLSAAP
GAPALPARLTVSVPLGPTLVHDLLLEDGTNLRSSEVRGPSTFIPEPGAELFAEIDTIRCH
AFPSEPEASRE
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagacctcgaatgcagcagaaggcaagcagcttagcgttcgtggcctgacccat
agctatggcggactgaatgcgatcagcgacatttctttcgagatagccgccggtgagatc
gtcgcgctcctcggaccgagcggctgcggaaaatccaccgtgttgcgcgccatcgcaggc
ctgatccaaccgaaaagcggtgtgatccagctcggaggcgaagacatcgccaatgtttcg
gcgcgtgcgcgcggtatcggcatggttttccagaactatgcgctgtttccacacctgacg
gtcgccgagaacatcgcctatccgctggcatgccagaaagtgggacgcaccgagcgccgc
gagcggattgaggaaatgctctcgctcgtgcagttgaagggatttggccatcggctgccg
cgtgagctttccggtggccagcagcaacgcgtggcagtggcccgcgcgattgccggaagg
ccttcacttctgcttctcgacgaaccgttcggtgccttggaccgggcgctccgtttcgac
ctgcaggtcgagcttctccatctgcagaagacgcttggcatcacgacgttgatcgtgacg
catgaccaggaggaggcgcagagcctagctggccgtctggtgctcatgaacaagggcaat
gtcgagcaaattgatacaccgatggccgtttatgaccgaccgaggtctctcttcgtcaat
accttcatcggtcaggccaatgtgttgcatggaacggtggaccgggtggaggcggaggca
accaccatctccctcgcgaatggcagggtcctcgttctgccgcgccgcctgaatttcacg
acgggctccaagatcacgatcacctgccgccccgaagatgtgcgtctgtctgcggcaccg
ggcgcaccggccctgccggcacggctgaccgtgtcagtgccgcttggtcccacccttgtc
catgatctccttctcgaagacgggacaaaccttcgctcctcggaggtccgcggaccttcg
accttcattcccgagccgggagcagagctctttgccgagatagacaccatcaggtgtcac
gcctttccgagcgaaccggaagcatcccgtgaataa
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