Agrobacterium fabrum: Atu5443
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Entry
Atu5443 CDS
T00070
Name
(GenBank) transcriptional regulator, TetR family
KO
K16137
TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
Organism
atu
Agrobacterium fabrum
Brite
KEGG Orthology (KO) [BR:
atu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
atu03000
]
Atu5443
Transcription factors [BR:
atu03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
Atu5443
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TetR_N
TetR_C_13
MDMPI_N
TetR_C_13_2
DUF6262
WHD_ArnR1
Motif
Other DBs
NCBI-ProteinID:
AAK90818
UniProt:
Q7D327
LinkDB
All DBs
Position
At:complement(436623..437171)
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AA seq
182 aa
AA seq
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MKVSREQMAENRRRILDVASRLFKDKGFEAVSVAEVMKAAGMTHGGFYGHFTSKDDLVAQ
TLAHALAADSDGDGEFSDFVRSYLAPRHRDNPGNGCPTAGLAAAIRHQTPAAKAAMAEGL
RAQIARIEKALPAQDPADGRRTAIGSWAAMVGAVILARAVDDPELSDEVLIQTRAWIDSR
TG
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtcagccgagaacagatggccgagaacagacgccggatcctggacgtcgccagc
cggttgtttaaagacaaggggttcgaggcggtcagcgtcgctgaagtgatgaaggcggcc
ggcatgacccatggcgggttctacgggcacttcacctcaaaggacgatctggtggcgcag
acgctggcgcacgcacttgcggcggacagtgacggagatggcgagttcagcgattttgtc
cgatcctatctcgcgcctcgccaccgcgacaatccgggcaatggctgcccgacggcaggt
ctggccgccgccattcgtcaccagacgcccgcagcgaaagccgccatggccgaaggtctg
cgcgcacagatcgcgcggattgagaaagcactcccggcgcaggacccagccgacgggcgc
cgtacagcgatcggaagctgggcggcaatggtgggggcagtcatcctcgcgagggcggtc
gacgaccctgaattgtctgacgaagttctcatacagacgcgtgcttggatcgatagccgc
accggatag
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