Acinetobacter thermotolerans: ABEF79_01395
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Entry
ABEF79_01395 CDS
T10604
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
atv Acinetobacter thermotolerans
Pathway
atv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
atv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ABEF79_01395 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atv03021
]
ABEF79_01395 (rpoC)
03400 DNA repair and recombination proteins [BR:
atv03400
]
ABEF79_01395 (rpoC)
Enzymes [BR:
atv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ABEF79_01395 (rpoC)
Transcription machinery [BR:
atv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ABEF79_01395 (rpoC)
DNA repair and recombination proteins [BR:
atv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ABEF79_01395 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Peptidase_M23
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
XBD67812
LinkDB
All DBs
Position
284461..288660
Genome browser
AA seq
1399 aa
AA seq
DB search
MKDLLDIMRKKTDSDGHAPVEFDRIRIGLASPEMIKSWSHGEVKKPETINYRTFKPERDG
LFCAKIFGPVKDYECLCGKYKRMKYKGVICEKCGVEVTTAKVRRERMGHIELASPVAHIW
FLKSLPSRIGLLLDMTLRDIERVLYFESYVVTDPGMTPFEKYQLLNDEEYFNALEEHGDE
FTAKMGAEAVQDLLKDIDLEAEIARLREEIPNTTSETKLKKASKRLKLMEAFKESNNKPE
WMVMNVLPVLPPDLRPLVPLEGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNE
KRMLQESVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVI
TVGPSLRLHQCGLPKKMALELFKPFIFAKLQASGQATTIKAAKKMVERETPEVWDVLASV
IRQHPVMLNRAPTLHRLGLQAFEPILIEGKAIRLHPLVCAAFNADFDGDQMAVHVPLTLE
AQLEARALMMSTNNILSPANGEPIIVPSQDVVLGLYYITRDAINAKGEGMVFADTDEVNR
ALATGQVDLHARVKARVHQTVIDENGNREQQTIIVDTTPGRCLLWEVVPEGMDFQQINVE
MTKKNISKIINSCYRKLGLKDTVIFADQLMYLGFRQATRSGVSVGMEDMLIPPQKQAIIG
KAEAEVREIEQQFEQGFVTAGERYNKVVDIWARTNDQVAKAMMDNLSYVTVKNKQGEDEK
QKSFNSIYMMSDSGARGSAAQIRQLAGMRGLMAKPDGSIIETPIKANFREGLTVLQYFIS
THGARKGLADTALKTANSGYLTRRLVDVAQDLVITEPDCGTHAGLVMTPFIQGGDVIENL
GTRVLGRVLAEDVVKPGTEDVILPRNTLIDEKLANFLEEQGVDEVKVRSVVSCESSFGVC
AKCYGRDLARGHLVNPGESVGVMAAQSIGEPGTQLTMRTFHVGGAASRTSAANSVQVRNK
GTVRFHNVKTVQHAKGHLVSVSRSGEIGIADEIGRERERYKLPYGASILIKDGEGVEAGG
IVATWDPHTHPLVTEVAGKVRFSQIADGVTATSKTDDATGMTTVEILPVTSRPASGKDLR
PAVVLDTVDGGEQFYFLPQNTILSVRDGETIGVGDVIGRVPQESSRTRDITGGLPRVADL
FEARKPKEHAILAEVSGIVSFGKETKGKNRLVITPDDGSEVYEELIPKWRTINVFEGEHV
NRGETISDGPQNPHDILRLKGEVALTNYIVNEVQDVYRLQGVKINDKHIEVIVRQMLRKV
EIIDGGDSSFIKGEQVDYIRVVQENQALLAQNKFPAKFERLLMGITKASLSTDSFISAAS
FQETTRVLTEAAVTGKEDDLRGLKENVVVGRLIPAGTGLAYHLERRRQEAEAAEFELHNN
FSDVDQALSQAFNDEFNGL
NT seq
4200 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagacttgctcgatatcatgcgcaaaaagacggattctgacggtcatgctcctgta
gagtttgatcgcatccgtattggtcttgcgtcaccagaaatgattaagtcatggtctcac
ggtgaagttaaaaagccagagacaatcaactaccgtacgttcaagccagagcgtgacggt
ttgttctgtgccaaaatctttggtccagtaaaagattacgaatgcttgtgtggtaaatac
aagcgtatgaaatacaaaggcgtcatttgtgaaaaatgtggcgttgaagtaacaactgcg
aaagttcgtcgtgaacgtatgggtcacatcgagctggcttctccagttgcacacatctgg
ttcctgaaatcattaccaagccgtatcggtttgttacttgatatgacactacgtgatatc
gaacgcgtactgtatttcgaatcttatgtagtaactgatccaggtatgactccattcgag
aaataccaacttctgaacgatgaagaatacttcaatgcgttagaagaacacggtgatgaa
ttcactgcgaaaatgggtgcagaagcggttcaagatctgttaaaagacatcgatcttgaa
gctgaaatcgcacgtctgcgtgaagaaattccaaacacaacttcagaaaccaagctgaaa
aaagcgtctaaacgtctgaagttgatggaagcgttcaaagagtcaaacaacaagccagaa
tggatggtgatgaatgtactgccagtacttccaccagatcttcgtccgttagttcctctt
gaaggtggtcgtttcgcgacttctgacctgaacgatctttaccgtcgtgtgatcaaccgt
aacaaccgtttaaaacgacttcttgatcttgctgctccagacatcatcgtacgtaacgaa
aaacgtatgctgcaagagtctgtcgatgcattgctggataacggtcgtcgtggtcgtgcc
atcactggttcgaacaaacgtcctctgaaatctttggcagacatgatcaaaggtaaacaa
ggtcgtttccgtcagaacttgctgggtaaacgtgttgactactctggtcgttcggtaatt
accgtaggtccaagcctgcgtttgcaccaatgtggtcttccgaagaaaatggcacttgaa
ttattcaagccattcatctttgcgaaactgcaagcatctggtcaagcaacaaccattaaa
gctgcgaagaaaatggttgaacgcgagactccagaagtttgggacgtactggcatctgtg
atccgtcagcacccagtgatgctgaaccgtgcgccgacacttcaccgtctaggtctgcaa
gcgtttgaacctattctgattgaaggtaaagcgatccgtcttcacccactcgtatgtgct
gcgttcaacgccgacttcgacggtgaccaaatggcggtacacgtaccattaacacttgaa
gctcaattagaagctcgtgcgttaatgatgtcaaccaacaacattctgtctccagcgaac
ggtgagccaatcatcgtaccgtctcaggacgttgtcttgggcttgtattacatcactcgt
gatgcaatcaatgccaaaggtgaaggcatggtgttcgcagatactgacgaagtaaaccgt
gcgcttgcaactggtcaggttgatctacacgctcgcgttaaagcacgtgtacaccaaact
gtaattgatgaaaacggtaaccgtgaacaacaaactattattgttgacacaacaccgggt
cgttgcttgctttgggaagttgtaccagaaggtatggatttccaacaaatcaacgttgag
atgactaaaaagaacatctctaaaatcatcaactcttgctaccgtaaactcggtcttaaa
gatactgttatcttcgctgaccaattgatgtacttaggtttccgtcaagcgactcgttca
ggcgtttcggttggtatggaagacatgctgattccaccgcaaaaacaagcgattattggt
aaagcagaagctgaagttcgtgaaatcgagcaacagttcgaacaaggtttcgtaactgcc
ggcgaacgttataacaaagttgtggatatctgggcacgtaccaacgaccaggtagcgaaa
gcgatgatggataacttgtcttatgtgactgtgaaaaacaaacagggcgaagacgagaaa
cagaaatcattcaacagcatctacatgatgtctgactctggtgcccgtggtagtgcggca
cagattcgtcagttggctggtatgcgtggtctgatggcgaaaccggacggttcgatcatc
gaaaccccaattaaagcgaacttccgtgaaggtttgaccgtacttcagtacttcatttca
acacacggtgcgcgtaaaggtttggccgatacagcactgaaaactgcgaactccggttac
ctgactcgtcgtctggtagatgttgctcaagacttggtcatcacagagccggattgtggt
acacatgctggtctggtgatgactccgttcattcaaggcggtgacgtaatcgagaacctg
ggtacgcgagtactgggtcgtgtgcttgctgaagatgttgtgaaaccaggtacagaagac
gttattctgcctcgtaacacattgatcgacgaaaaacttgcaaacttcctggaagagcaa
ggtgtcgacgaagtgaaggtacgttcagttgtatcttgtgaatcttcattcggtgtttgt
gcgaaatgttacggtcgtgatcttgcacgcggtcacttggtgaacccaggtgaatctgtc
ggtgtaatggctgctcagtcaatcggtgaaccaggtacacagttaaccatgcgtaccttc
cacgtgggtggtgctgcgagccgaacttctgctgcaaacagcgtacaagttcgtaacaaa
ggtacagtacgtttccacaacgtaaaaactgtacagcatgccaaaggtcacctggtatct
gtttctcgttctggtgaaatcggtatcgcggatgagatcggtcgtgagcgcgaacgttac
aaactgccatacggtgcatctatcctgatcaaggatggcgaaggcgtagaagcaggcggt
atcgttgcaacttgggatccgcatacacatccactggttacagaagttgctggtaaagtt
cgcttcagccaaatcgctgatggtgtaactgcaacatcgaaaactgatgatgcaacaggt
atgactactgttgaaatcttgcctgtaacttcgcgtccagcgtctggtaaagatttacgt
ccagctgttgtgcttgacacagtagatggcggtgaacagttctacttcctgccacaaaac
accattctttctgtccgtgatggcgaaactattggtgtgggtgacgttatcggtcgtgta
ccacaagaatcttcacgtactcgtgatattaccggtggtctgccacgtgttgctgacttg
ttcgaagcacgtaagccgaaagaacacgcgatccttgcagaagtgtctggtatcgtaagc
ttcggtaaagagaccaaaggtaagaaccgtctggtcatcactccagatgacggttcagaa
gtttatgaagaactgattccgaaatggcgtaccatcaacgtgtttgaaggtgaacatgtg
aaccgtggtgaaaccatttctgatggtccacagaacccgcatgacatcttacgtctgaaa
ggtgaagtggcgttgaccaactacatcgtgaacgaagttcaggacgtttaccgtctgcaa
ggtgtaaaaatcaacgataaacacatcgaagtaatcgtacgtcagatgctgcgtaaagtt
gaaatcatcgacggtggtgattctagcttcatcaaaggcgaacaagtggattacatccgc
gttgttcaagagaaccaagcgctgcttgctcagaacaagttccctgcgaagtttgaacgt
ttgttgatgggtatcactaaagcgtcgctttctactgactcgttcatctctgctgcatcg
ttccaggaaactactcgtgtgttaactgaagcggctgtaacaggtaaagaagatgatctg
cgcggtctgaaagaaaacgtggttgtaggtcgtctgattccagcgggtacaggtctggct
taccacttagaacgtcgtcgtcaggaagcagaagctgcagaatttgaactgcacaacaac
ttctctgatgttgaccaagcactgagccaagcatttaatgatgagtttaacggtctgtaa
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integrated database retrieval system
