Acinetobacter thermotolerans: ABEF79_02080
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Entry
ABEF79_02080 CDS
T10604
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
atv Acinetobacter thermotolerans
Brite
KEGG Orthology (KO) [BR:
atv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
atv03032
]
ABEF79_02080 (topA)
03400 DNA repair and recombination proteins [BR:
atv03400
]
ABEF79_02080 (topA)
Enzymes [BR:
atv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ABEF79_02080 (topA)
DNA replication proteins [BR:
atv03032
]
Prokaryotic type
DNA Topoisomerases
ABEF79_02080 (topA)
DNA repair and recombination proteins [BR:
atv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ABEF79_02080 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Toprim_4
Toprim_C_rpt
DUF7351
Motif
Other DBs
NCBI-ProteinID:
XBD67939
LinkDB
All DBs
Position
436839..439481
Genome browser
AA seq
880 aa
AA seq
DB search
MANAPRSTSKSSTAKSSEAGSKRALVIVESPAKAKTINKYLGPNYIVKSSVGHVRDLPTG
GSAKTAEKKPATRTKLTEAEKAEKSQQALINRMGVDPEHGWKAKYEVLPGKENVVSELKK
LASQVDEVYLATDLDREGEAIAWHLKEVIGGDDSRYQRVVFNEITKNAIQEAFKHPTRLD
TNKVNAQQARRFLDRVVGFMISPLLWEKIARGLSAGRVQSVAVKLVVEREREIRKFIPEE
YWQVFADTKAKKDDIRLEAVKQNGKTLKLHNKAETDALLDVLKAAEYKVISREDKPTKVN
PSAPYITSTLQQAASTRLGFSVKKTMMLAQRLYEAGFITYMRTDSTFLSDDAVNMVRGHI
EMEYGEKYLPAKPNRYGNKAGAQEAHEAIRPSNVALKGDSLQGVERDAQRLYDLIWRQFV
ACQMTPAEYLSSTILVDANGVELKAKGRILVFDGFTKVRGQNKSDDDVLLPAVKVGEVLK
LEKLDPSQHFTKPPARFTEASLVKELEKKGIGRPSTYAAIISTIQDRGYVKLENRRLFAE
KMGEIVTDRLDESFNNLMNYDFTADLEGQLDKVADGERNWKELLDSFYGDFKHRLTTAQG
ENGMRRNQPVEVDAVHCKECDRPMQIRTGTTGVFLGCSGYNLPPKERCKGTLNLTPVESL
AALSDDDAAETADLMSKKRCPVCGTAMDSYVIDGGRKLHICGNNPDCAGYELEEGEFKIK
GYDGPTIPCDKCDGEMQLKTGRFGPYFACTSCDNTRKVLKNGQPAPPRVDPIRMEHLRST
KHDDYFVLRDGAAGLFLAASKFPKVRETRAPKVAELRTVADQLDPKYQFLLQAPDTDPDG
NPTLVKFSRKNQAQYIGSETSEGKQTKWSMIYKDGKWVEA
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatgctcctcggtccacatcaaaaagcagcacagcgaagtcttctgaggctgga
agtaagcgtgccttggtgattgtggagtcgcctgcaaaagcgaaaacaatcaacaaatat
ctcggtccgaattacatcgtgaaatcatcggtgggtcacgtccgtgacttgccgacaggt
ggttctgctaaaacggccgagaaaaagccagcgacgcgaaccaagctgactgaagcggaa
aaagcggaaaaatcacagcaggcgttgattaaccgtatgggcgtcgacccggaacatggc
tggaaagccaaatacgaagtgcttccgggcaaagaaaacgttgtttctgaactgaaaaaa
ctggcatcgcaggtcgatgaagtctacctggcaacggatttggaccgtgaaggggaagca
attgcctggcacttaaaagaagtgattggcggcgatgattcacgttaccagcgtgtagtc
tttaacgaaattaccaaaaatgccattcaggaagcgttcaagcatccaacccgtctggat
accaacaaggtcaacgcgcagcaggcacgccgcttcctggaccgtgttgttggcttcatg
atctcgccattgctgtgggaaaaaattgcgcgtggtctgtctgctggtcgtgtgcagtcg
gttgcagtgaaactggtagtggaacgtgaacgtgaaatccgcaagtttattcctgaagaa
tactggcaggtgtttgctgataccaaagccaaaaaagatgatattcgcttagaagcggtt
aagcagaatggcaagactttaaaactgcacaacaaagcggaaacggatgctttactggat
gtgctgaaagctgcggaatataaagtcatcagccgtgaggacaaacccactaaggtcaat
ccaagcgcgccgtatatcacttcgactctgcaacaagccgcaagtacgcgtcttggtttc
tcggtgaagaaaaccatgatgctggcacagcgtctgtatgaagcaggtttcattacctat
atgcgtaccgactcgaccttcctgagcgatgatgcagtcaatatggtgcgtggccatatt
gaaatggaatatggcgagaaatatttaccagccaagcctaaccgttatggcaataaggcc
ggtgcacaggaagcccacgaagcgatacgtccgtctaatgtggcattgaaaggggatagc
ctacagggtgtagaacgtgatgcacagcgtctgtatgacctgatctggcgccagtttgtg
gcctgtcagatgacaccagcagaatacctgtcatccactattctggtcgatgccaatggt
gttgagctgaaagccaaaggccgtatcctggtatttgatggctttactaaagttcgtggc
caaaacaaatctgatgatgatgtgctgttgcctgcggtaaaagtcggtgaagtactgaaa
ctggaaaaactggatccatctcagcacttcactaaaccaccggctcgttttactgaagca
tcattagtgaaagaactcgagaaaaagggtattggtcgtccttcgacttatgctgccatt
atctcaaccattcaggatcgtggttatgtaaaactggaaaaccgtcgtctctttgctgag
aagatgggcgagatcgtcacagatcgtctcgatgaaagctttaataacctgatgaattat
gactttaccgccgatcttgaaggccagctggataaagtggcagatggtgagcgtaactgg
aaagagctgctggacagcttctacggtgatttcaaacatcgtctgactacggcacagggt
gagaacggcatgcgccgtaaccagccggtagaagtcgatgcagtgcactgtaaagaatgt
gaccgcccaatgcagatccgtaccggcaccaccggggtgttcttgggctgttcaggctat
aacctgccaccaaaagaacgctgtaaagggacactgaacctgactccggtagagtcattg
gcagcattgtcagatgatgatgccgctgaaactgctgacctgatgtcgaaaaaacgttgt
ccagtttgcggaactgctatggacagctatgtgattgatggtggccgtaaactgcatatc
tgtgggaataacccggactgtgccggttatgagctggaagaaggcgagttcaagattaag
ggttacgatggtccaaccattccatgtgataaatgtgatggggaaatgcagctgaaaact
ggccgttttggtccatactttgcctgcaccagctgtgacaatacccgtaaagtcttgaaa
aatggtcagcctgcgcctccgcgtgtggatccaatcaggatggaacacctgcgctcaacc
aagcatgatgattactttgtcctgcgtgatggtgctgccggtctattcttggcagccagt
aagttcccgaaagtacgtgaaacccgtgcgccgaaagttgctgaattgcgtactgtagcc
gatcagctggatccaaaatatcagttcctgttacaggcgccagatactgatccagatgga
aacccgactttggtgaaattcagccgtaagaaccaggcacaatatatcggttcggaaacg
tctgaaggtaagcaaaccaaatggtccatgatctataaagatggaaaatgggtggaagcc
taa
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