Acinetobacter thermotolerans: ABEF79_02615
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Entry
ABEF79_02615 CDS
T10604
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
atv Acinetobacter thermotolerans
Pathway
atv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
atv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABEF79_02615 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atv03019
]
ABEF79_02615 (pcnB)
Enzymes [BR:
atv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
ABEF79_02615 (pcnB)
Messenger RNA biogenesis [BR:
atv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
ABEF79_02615 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
XBD68039
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All DBs
Position
549086..550555
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AA seq
489 aa
AA seq
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MQTLRASKCGLSTAQLPSYILDVIDALTKAGYEAYIVGGGVRDLMLGLNPKDFDAVTNAT
PAQVKEVFGRRCRIIGRRFELAHVYSGRELVEVATFRAPPKKAVTSAQGMILRDNNWGTI
EQDFARRDFSINALYYQPRKGIVLDFCNAIDDIKHKTLRLLGDPALRFEEDPVRMLRTLR
FAAKLNFSIDPTILDIFTPEMTQLLRDVSPHRLYDESQKLFTMGHLQRVLPMLIDFGIWR
QLFADIKPEITPFIELAAKNTDQRISIGKTINPAFFYAVLLWKPFLERCDFYLGKGVVPA
EARAQAGLDVLKRQATRTIIPRFAETFIREVWEMQTRLLNPKPQQIEALSGHARFRAGFD
FLLLREKSGDETVQSMGSWWDAYQQMTADEKERTIAQYNRQRAKNRRKASQEEHLEQRLA
AQDTAEIEPLVNEPEPRSRRARKAKMEAASKPISHAAASSSGEIGPDHPILKRKRVQRDL
SQVVFGPTQ
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaactttgcgcgcgtcaaaatgtggtttatcaaccgctcaattaccttcttatatc
ctcgatgtgattgatgccttaaccaaggctggctatgaagcttatattgttggtggtggt
gtccgggatctgatgttgggactcaatcccaaggatttcgatgctgtcactaatgcgact
cccgctcaggtcaaagaagtattcggacgacgttgccggattatcggacgtcgttttgag
cttgctcatgtctattctggtcgagaactggtcgaagtggcgactttccgtgcaccaccg
aaaaaagccgtgacttcagcgcagggtatgatcctgcgtgacaataactggggtaccatt
gagcaggattttgcacgccgtgatttttccattaatgcgctgtactaccagccacgcaaa
ggcatcgtgctggatttctgtaatgcgattgacgacatcaagcacaagaccttacgtctg
ttaggtgatccggcactgcgtttcgaggaagatccggtgcggatgttacgtaccttgcgt
tttgcagccaagctaaacttcagtattgatccaacgattctggatatctttactccggaa
atgacccagttgctgcgtgatgtgtctccacaccgtttgtatgacgagtctcaaaagttg
ttcaccatgggccatttgcaacgcgtactgccaatgctgatcgattttggtatttggcgt
caactgtttgcggatatcaaaccagaaataacacctttcattgaattggctgccaagaat
actgatcaacgtatttcgattggcaagaccatcaacccggcattcttctatgccgtgttg
ctgtggaaaccgttcctggaacgttgcgatttctatctgggtaaaggtgtcgtacctgcc
gaagcacgtgcccaagccggtttggatgtattaaagcgtcaggcaacacgaaccatcatt
ccacgttttgcggaaacctttatccgtgaagtctgggaaatgcaaacccgtctgctgaat
ccaaaaccacagcagattgaagctttatcgggtcatgcacgtttccgtgccggttttgac
ttcctgttgttgcgtgaaaaatcaggtgatgaaacggttcaaagcatgggtagctggtgg
gatgcttatcagcagatgaccgcagatgagaaagaacgtacgattgcgcaatataatcgt
caacgggccaaaaaccgtcgtaaggctagtcaggaagaacatctggaacagcgtctggct
gctcaggatactgccgagattgagccattggtaaatgaacctgaaccacgtagccgtcgt
gcccgtaaagccaaaatggaagctgcctctaaaccgatttctcatgcggcagccagcagc
agtggcgagattggtccagatcatccgattctgaaacgcaaacgtgtacagcgtgattta
agccaggttgtttttggaccgacacaatga
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