Acinetobacter thermotolerans: ABEF79_06175
Help
Entry
ABEF79_06175 CDS
T10604
Symbol
hrpA
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
atv Acinetobacter thermotolerans
Brite
Enzymes [BR:
atv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
ABEF79_06175 (hrpA)
Messenger RNA biogenesis [BR:
atv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
ABEF79_06175 (hrpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XBD69084
LinkDB
All DBs
Position
1262251..1266072
Genome browser
AA seq
1273 aa
AA seq
DB search
MARDLHRLNRLRKGKDANEKQYQELFEKSHLKVLERVERIPNIKLNQDLPVTQYADKLIE
AIQKHQVIIVAGETGSGKTTQLPQIAMLAGRGLTGLIGHTQPRRLAARSVSQRIAEEVGE
KLGESISFKVRFNEQGSQDSIVRLMTDGILLAELANDRFLTKYDTIIIDEAHERSLNIDF
IMGYLKQLLPRRKDLKVIITSATLDVNRFSNYFNGAPIFEVEGRSYPVEVRYRPISEMTI
GGSDDDEFDDFEENLPRAVVAAVEECLQDAQEKGHPEHADILIFASTEQEIRELQETLIK
HGPRHTEVLPLYARLALAEQQKIFNPSGGGRRIIIATNVAETALTVPNIRYVIDSGFARI
SRYSYRSRVQRLPIEAISQAAANQRKGRCGRIAPGVCIRLYSEEDFLSRPEFTEPEIKRT
NLASVILQMQSLKLGSLEEFDFIEPPDHRLVNDGRKLLIELGALSEKKNELTKIGYQMAK
MPIDPRLARMILGGAHFGALNEALVIVAALAVQDPRERPADKQMQADQKHALFREADSDF
LFYIKLWETLHDNRENMSENNRRTFARNHFLSWLRLREWKKTHEQLVDLAKGLKLSFNEK
KASYENLHRALLTGLLSFIANKTDERNVFMAVRQQKARVFPASTLHKTNTPWVMAFEMVE
TSQVYLRTLAKIEPEWILLAARDLVKHHYFEPHWSKKAGVVNAYDQISLFGLIIEPKRQV
NYEKVDQVAAHEIFLRDALTTGNLGIMPPFLKHNLLKLEEVERVEDKLRRRDLVVDEETI
YQFYASKVPPEVASRRSFEDWRATVEPQNPRYLFVDDDALWMNDRPTTQQFPDYLRNGEL
RLAVSYRFDPSHDEDGATVRIPVQALPQVDENIWSWGIPGWREELIEALLKALPKDKRRN
LVPIPDTVHKLLSRIDATHLQQHIFSFLAFQLRGEQITEKDFSFERVEQYLLPLIKVIDE
KGRVIEQGRDLDEQKARCRTETHSPVKQLKGEHTTFPENFVFEASQKVTGVVVKQYQALV
PTKDFAALEQKDESGVVIQTFNDQVEAIRQHRAGVIRLVHMQLGDLVRQLKKQISKPLAL
AYSPLGDKAKLEQMLVYATLQLSINELPVNAQEFQKLVEDVKKSFLTHGQTALKDITDIY
TQWQEIRRKLLVLDDSVFGKNIDDIEDQLDLMNLADFVYSKPTDVWIEFPRYLKALLLRL
DRLPNNLQRDDSAIDQIDPWMEKLFKFKNDARLKELYFMVEELRISLFSQPMKTKAPVSP
NRLQKVWDRLGIS
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
atggcacgagaccttcaccgtttaaatcgtttacgaaaaggtaaagatgccaacgaaaag
cagtatcaggaattatttgaaaaatcccatcttaaagtgctggaacgtgtcgagcgcatt
cccaatatcaagctaaaccaggacttgccggttacccagtatgccgataagctgattgaa
gcgatccagaaacatcaggtcattattgttgcgggtgaaaccggttctggtaaaacgact
cagctccctcaaattgccatgctggcaggtcgtggattaaccggtctgattggtcatacc
cagccgcgtcgtttggcagcgcggagcgtatcgcagcgtattgccgaagaagtgggtgaa
aaactcggtgaatcaatttcctttaaagtccgttttaatgaacagggctcacaggattcg
attgtccgtttgatgacggatggtattctgttggcagaactggccaatgaccgattccta
accaaatacgacaccatcattatcgatgaggcacatgaacgttcgctgaacatcgacttc
atcatgggctatctgaagcagttactgccacgccgtaaagatctgaaagtcatcatcacc
tcagcaacgctggatgtaaaccgttttagtaactactttaatggtgccccaattttcgaa
gtggaagggcgtagctatcctgtggaagtgcgttaccgtccaatttccgaaatgaccatt
ggtggcagtgatgacgacgagtttgatgatttcgaagaaaacctgccacgtgctgttgtt
gcagctgtagaagaatgtcttcaggatgcacaagagaaaggtcatccggaacatgccgat
atcctgattttcgccagtaccgaacaggaaattcgtgaactacaggaaaccctgatcaag
catggcccacgacacactgaagtcttgccactgtatgcacgtctggcattggcagaacag
cagaaaattttcaatccatcgggtggtgggcgacgtatcattattgccaccaacgtggca
gaaaccgccctgactgtaccgaatatccgttatgtgattgatagtggttttgcccgtatt
tcacgttatagctaccgttcccgcgtacagcgtttgccaatcgaagccatttcccaggca
gcagcgaaccagcgtaaaggacgttgtggccgtattgcaccgggtgtgtgtattcgactc
tattcagaagaagattttttaagccgtccagagtttaccgaaccggaaatcaagcggacc
aacctggcatccgtgattctgcagatgcagagcctgaaattgggttcattagaagagttc
gattttattgagccaccagatcaccgactggtgaatgatggtcgtaagctgctgattgaa
ctaggtgctttatccgagaagaaaaatgaactaaccaagattggttatcagatggcaaaa
atgccgatcgatccgcgtctggcacggatgattcttgggggtgcgcattttggtgcctta
aatgaagcgctagtcattgtcgcagcgttggcggtacaggacccgcgtgaacgtccagct
gacaaacagatgcaggcagatcagaaacatgccttgttccgtgaagcagattcagacttc
ctgttctatatcaagttgtgggaaacgctgcacgacaatcgcgaaaacatgagtgagaac
aatcgccgtacttttgcgcgtaatcacttcctcagctggttgcgtttgcgtgagtggaag
aaaacccatgaacagctggttgatttagctaaaggcttaaagctgtcctttaatgaaaag
aaagctagctatgaaaacttgcaccgtgccttattgaccggactattatcgtttattgct
aacaagactgatgagcgtaacgtgtttatggcggtgcgtcagcagaaagcacgtgtattc
ccagcatctactttgcacaaaaccaataccccgtgggtaatggctttcgagatggtggaa
acctcacaagtttatctgcggactttggcaaagatcgaaccggaatggattttgctggcg
gcgcgtgatctggtcaaacatcattattttgaaccgcactggtcgaaaaaagcaggtgtg
gtaaatgcctatgaccagatttccctgtttggcctgatcattgagccaaaacgtcaggtg
aattatgaaaaagtggatcaggttgcagcgcatgaaatcttcctgcgcgatgcactgacc
accggtaacctaggcatcatgccgccatttctaaagcataacttgttaaagcttgaggaa
gtagaacgggtcgaagacaaactgcgccgtcgggatctggtcgtggatgaagaaaccatt
tatcagttctatgcctctaaagtgccgccagaggtagcgagtcgccgtagctttgaagac
tggcgcgcgacggttgaaccgcaaaatccacgttatctgtttgtggatgatgatgcactg
tggatgaatgaccgtccgacaacgcagcagttcccggactatctgcgcaatggcgagtta
cgtctggcagtgagctatcgttttgatccaagccatgatgaagatggtgcaacggttcgc
attccggtgcaagctttgccacaggtggatgaaaatatctggtcttggggcattccgggc
tggcgtgaagagctaatcgaagccttgttaaaagccttgccgaaagataaacgccgtaat
ctggtaccgattccggatactgtgcataagttgctgtcacgcattgatgcaacacatctg
caacaacatatttttagtttcctggcattccagttgcgtggtgaacagatcacagaaaaa
gacttctcttttgagcgggtcgagcagtatttgttgcctttaattaaggtaattgacgag
aaaggtcgtgtgatcgaacagggtcgtgatctggatgaacagaaggcccgttgccgtacg
gaaacccatagtccggtaaaacaacttaaaggtgaacatacgacttttcctgaaaacttt
gtctttgaagcttcgcaaaaagtgacaggcgttgtcgtgaagcagtatcaggcactggta
ccgaccaaagacttcgctgcattagagcaaaaagatgaatccggtgtggtgatccagacc
tttaacgatcaggttgaagcgattcgtcagcaccgtgccggggtgatccgactggtgcat
atgcagctcggtgatctggtgcgtcaactgaaaaaacagatttccaaaccgttggctttg
gcttattcaccacttggcgacaaagcgaagttggaacaaatgttagtttatgccacacta
cagttgtccataaatgagctgcctgtcaatgcgcaagagttccaaaagttagttgaagat
gtaaaaaaatctttcttaactcatggtcagactgcgctgaaagatatcactgatatttat
acccagtggcaggaaattcgccggaaactcttggttttagacgattctgtctttggtaag
aatattgatgatattgaggatcagctcgatttgatgaatttggccgactttgtttatagc
aagccgacggacgtctggatcgaatttccgcgctacctaaaagcgctgcttttgcgactt
gaccgtttgccaaataatctgcaaagggatgattctgccattgatcaaatcgacccttgg
atggaaaaattgttcaaatttaaaaatgacgctcgcctgaaagaactgtatttcatggtc
gaggaattacggatctctttattttcacaaccgatgaaaactaaagcgcctgtttctccg
aatcgcctacaaaaagtatgggatcgtcttggaatcagttaa
DBGET
integrated database retrieval system
