Acinetobacter thermotolerans: ABEF79_06240
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Entry
ABEF79_06240 CDS
T10604
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
atv Acinetobacter thermotolerans
Pathway
atv02024
Quorum sensing
atv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
atv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABEF79_06240 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ABEF79_06240 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atv03019
]
ABEF79_06240 (hfq)
03036 Chromosome and associated proteins [BR:
atv03036
]
ABEF79_06240 (hfq)
Messenger RNA biogenesis [BR:
atv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
ABEF79_06240 (hfq)
Chromosome and associated proteins [BR:
atv03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
ABEF79_06240 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
XBD68707
LinkDB
All DBs
Position
1279143..1279649
Genome browser
AA seq
168 aa
AA seq
DB search
MSKGQTLQDPFLNSLRKERIPVSIFLVNGIKLQGHIESFDQYVVLLKNTVSQMVYKHAIS
TVVPARNPRPAGAPAGAQGAGFGGQAGGFGGQPGFGGQGGFGGQGGFGGQGGFGGQGGFG
GQGAGFGGQGAGFGGQGGFGGQGGFGGQGAGFADDAKFEDTPDDENNR
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaggtcaaactttacaagatccgttcttgaattcccttcgtaaagaacgcatt
ccagtttctatcttcctcgttaacggtatcaaactacaaggtcatatcgaatcatttgac
caatacgttgtattattaaaaaatactgtaagccaaatggtttacaaacacgcgatttct
acagtagttcctgcacgtaacccacgtcctgctggtgcgcctgctggtgctcaaggtgct
ggcttcggtggtcaagctggtggcttcggcggtcaacctggttttggtggtcaaggtggc
ttcggtggtcaaggtggcttcggtggtcaaggtggcttcggtggtcaaggtggcttcggt
ggtcaaggcgctggctttggtggtcaaggcgctggctttggtggtcaaggtggcttcggt
ggtcaaggtggtttcggtggtcaaggcgctggctttgctgatgatgcaaaattcgaagat
actccagatgacgaaaacaatcgttaa
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