Acinetobacter thermotolerans: ABEF79_10025
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Entry
ABEF79_10025 CDS
T10604
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
atv Acinetobacter thermotolerans
Pathway
atv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
atv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABEF79_10025 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atv03019
]
ABEF79_10025 (rhlB)
Enzymes [BR:
atv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ABEF79_10025 (rhlB)
Messenger RNA biogenesis [BR:
atv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ABEF79_10025 (rhlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UvrA_inter
Utp25_C
Cas3-like_C_2
Glyoxalase
DUF6914
Toprim
BTRD1
Motif
Other DBs
NCBI-ProteinID:
XBD66490
LinkDB
All DBs
Position
complement(2023007..2024158)
Genome browser
AA seq
383 aa
AA seq
DB search
MSSGFETLNLHPNLKKAIDALGFTSMTPIQQKVLKFTLAGHDAIGRAQTGTGKTAAFLIS
VINDLLNNPVKEQRYRGEPRALILAPTRELALQIESDALELTKYTDLSVVTLVGGVDFDK
QKAQLDKAPVDIMVATPGRLIDFVEQKEVWLDLIEFLVIDEADRLLDMGFIPSVKRIVRF
SPRKEQRQTLMFSATFSYDVLNLAQQWLFEPVTVEIEPEKKTNADVEQRVYMVAKADKYK
LLQDILRDEPIEKVMIFANRRDQVRKLYDHLKKDGYKVVMLSGEIAQDKRLKMLDQFKNG
KHNIMIATDVAGRGIHVDGVSHVVNFTLPEQSDDYVHRIGRTGRAGTRGVSISFLSEDDA
FYLPEIEKAIGQKLPLTRLEGYC
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctggttttgagaccttaaatttacatcccaatctaaaaaaagcgattgatgcc
ttgggctttaccagcatgacgcccatccagcagaaggttctgaagttcacacttgcagga
catgatgctattggccgtgctcaaacaggtacaggtaaaactgcagctttcctgatcagt
gtgattaacgacctgctcaataatccggtgaaagaacagcgctatcgtggtgagccacgt
gctctgattctggcgccgacccgtgagctggcacttcaaatcgaaagtgatgcgctggag
ttgaccaaatacaccgacttaagtgtggtaacgctggtgggtggtgtagatttcgataaa
cagaaagcgcaactggataaagcgccggtcgatattatggtggcaactccaggtcgactg
attgactttgtcgaacagaaagaagtctggcttgatctgatcgaattcctggtgattgat
gaagctgaccgtttgctggatatgggctttatcccatcagtaaaacgtatcgtgcgtttc
tcgccacgcaaagaacagcgtcaaaccttgatgttctcggcaacctttagctatgacgta
ctaaatctggcacaacaatggctgtttgaaccggtaactgttgaaatcgagccggaaaag
aaaaccaatgccgatgtagaacagcgcgtttatatggttgcgaaagccgacaaatacaaa
ctgcttcaggatatcctgcgtgacgaaccgatcgagaaagtgatgatcttcgccaatcgt
cgtgatcaggtgcgtaagttgtatgaccacctgaaaaaagatggttataaagtcgtaatg
ctgtctggtgaaatcgcccaagacaagcgtttaaaaatgctagatcagtttaagaatggc
aagcacaacatcatgatcgcaaccgatgttgcgggtcgtggtattcatgtcgacggtgta
tcacatgtggtgaactttactctgccagaacaatccgatgactatgtacaccgtattggc
cgtaccggtcgtgccggaacccgtggtgtgagtatcagcttcttgtccgaagatgatgcg
ttctatctgccagaaattgaaaaagcgattggtcagaaattaccactgacccgactggaa
ggttattgctaa
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