Pseudazoarcus pumilus: C0099_02955
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Entry
C0099_02955 CDS
T05265
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
atw
Pseudazoarcus pumilus
Pathway
atw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
atw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
C0099_02955 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atw03021
]
C0099_02955 (rpoB)
03400 DNA repair and recombination proteins [BR:
atw03400
]
C0099_02955 (rpoB)
Enzymes [BR:
atw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
C0099_02955 (rpoB)
Transcription machinery [BR:
atw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
C0099_02955 (rpoB)
DNA repair and recombination proteins [BR:
atw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
C0099_02955 (rpoB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_2
UbiD
FH2
Motif
Other DBs
NCBI-ProteinID:
AUN93992
UniProt:
A0A2I6S414
LinkDB
All DBs
Position
621528..625658
Genome browser
AA seq
1376 aa
AA seq
DB search
MAYSYTEKKRIRKSFAKRTSEQDIPFLLATQIDSFVSFLQAEVSAQSRLNEGLQAAFTSI
FPISSHSGNARLEFVSYHLGEPPFDVKECQQRGLTYAAPLRARVRLVIMDRDAPKETVKE
VKEQEVYMGEIPLMTNTGSFVINGTERVIVSQLHRSPGVFFDHDRGKTHSSGKLLFSARV
IPYRGSWLDFEFDPKDCLFFRVDRRRKMPVSILLRSIGMSTEEILASFHDFDEFRLESEG
VSFTLVPERLRGEVARFDIVDADGNVMVAREKRITARHIREIEKAGVKTMSVPDDFLVGR
VVATSLVDPETGEIIAKANDEITEELIEKMRAAGIAGLQTLYVNDLDRGPYISSTLRIDD
TADQWAARVAIYRMMRPGEPPTEDAVETLFHGLFFSEERYDLSSVGRMKFNRRAYPEAID
DRAPGWVKRFYERVGKMEEIGPGTLSSDDILAVVGILLELRNGRGEIDDIDHLGNRRVRS
VGELAENQFRAGLVRVERAVKERLSQAESENLMPHDLINAKPISAAIKEFFGSSQLSQFM
DQTNPLSEITHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSL
AVYARTNRYGFLETPYRKVEDGKVTDQVDYLSAIEEGHYVIAQANAEVTDGRLSGDLVSC
RHKGEFSLSTTDQVQYMDIAPGQIVSVAASLIPFLEHDDANRALMGANMQRQAVPCLRPE
KCLVGTGMERTVAVDSGTAVQALRGGVVDYVDANRIVVRVHDDETLSGEVGVDIYNLIKY
TRSNQNTNINQRPIVKVGDVLAKGDVIADGASTDLGELALGQNMLVAFMPWNGYNFEDSI
LISERVVAEDRFTSVHIEELTVVARDTKLGPEEITRDIASLGEAQMGRLDESGIVYIGAE
VQAGDVLVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDTSLRVPSGMVGTVIDVQIFTR
EGIERDKRAQSIIDDMLRGFKTDLADQMRIVERDAFARIRRLIVGQKVNGGPKKLAKGAK
VTDEYLDGLEPHSWFDIRMADEELATQLEAVRDGLDKTRKDFDAAFELKKKKLTQGDELP
PGVQKMVKVHLAVKRRLQPGDKMAGRHGNKGVVSRIVPVEDMPYMDDGTPVDVALNPLGV
PSRMNIGQILETHLGRAAKSLGQKIDGMLRANAKVAEIRALLDEIYNRSGKTEDLASFSD
DDVIELAKNLRNGVPFATPVFDGAQEDEIEKMFELAGLDSGGQVTLYDGRTGDAFDRKVT
VGYKHVLKLHHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYT
LQEMLTVKSDDVTGRTKVYENIVKGEHKIDAGMPESFNVLVKEIRSLAIDIDLDSY
NT seq
4131 nt
NT seq
+upstream
nt +downstream
nt
atggcgtattcctacaccgaaaagaagcgtatccgcaaaagcttcgccaagcgcacttcc
gagcaggacattccgttcctgctggcgacgcagatcgattccttcgtgtcgttcctgcag
gccgaggtctctgcgcagtcgcggctcaacgaaggtttgcaggcagccttcacctccatc
ttcccgatctccagccacagtggcaatgcgcgcctggagttcgtgagctaccacctcggc
gagccgcccttcgacgtcaaggaatgccagcagcgtggcctgacctatgctgccccgctg
cgcgcgcgcgtgcgcctggtgatcatggatcgcgacgcgcccaaggagaccgtcaaggag
gtcaaggagcaggaagtctacatgggcgagatcccgctcatgacgaacaccggttccttc
gtcatcaacggtaccgagcgggtcatcgtctcgcagctgcatcgttcgccgggcgtgttc
ttcgatcacgaccgtggcaagacgcactcgtcgggcaagctgctgttctcggcccgcgtg
attccctaccgtggttcctggctggacttcgagttcgaccccaaggactgcctgttcttc
cgtgtcgaccgtcgccgcaagatgccggtgtcgatcctgctgcgctcgatcggcatgagc
accgaggaaatcctcgcctccttccatgacttcgacgagttccgcctcgaatccgaaggc
gtgagcttcacgctggtgcccgagcgcctgcgcggcgaggtagcgcgcttcgacatcgtc
gatgcggacggcaacgtcatggtcgcgcgcgaaaagcgcatcacggcgcgtcatatccgc
gaaatcgagaaggcaggggtcaagacgatgtcggtgcccgacgatttcctcgtcggtcgc
gtcgtggcgaccagcctggtggatcccgaaaccggtgagatcatcgccaaggccaacgac
gagatcaccgaggaactgatcgaaaagatgcgcgcggctggcattgccgggctgcagacg
ctctacgtcaatgacctcgaccgcggtccctatatctcctcgacgctgcgtatcgatgac
acggccgaccagtgggccgcgcgcgtggcgatctaccgcatgatgcgtccgggcgagccg
cccaccgaagacgctgtcgagaccctgttccacgggctgttcttctcggaggagcgctac
gacctgtcctcggtcgggcgcatgaagttcaaccgtcgcgcctatccggaagcgatcgac
gatcgcgctccgggctgggtcaagcgcttttacgagcgcgtcggcaagatggaggagatc
gggccgggcacgctctcgagcgacgacatcctggccgtggtcggcatcctgctcgagctg
cgcaacggtcgcggcgagatcgacgacatcgatcacctcggcaaccgtcgcgtgcgttcg
gtgggtgagctggccgagaaccagttccgtgccggtctggtgcgcgtcgagcgcgccgtc
aaggagcgcctgtcccaggccgagtccgagaacctgatgccgcacgacctgatcaacgcc
aagccgatctcggccgcgatcaaggagttcttcgggtccagccagctgtcgcagttcatg
gaccagaccaacccgctgtccgagatcacgcacaagcgtcgcgtctcggcgctcggtccg
ggcggcctgacgcgcgagcgcgccggcttcgaggtgcgcgacgtgcacccgacgcactac
ggccgcgtgtgcccgatcgagacgccggaaggtccgaacatcggtctgatcaactcgctc
gccgtgtatgcgcgcaccaaccgttacggctttctcgaaaccccgtaccgcaaggtcgag
gacggcaaggtcaccgaccaggtcgattacttgtcggccatcgaggaaggtcactacgtc
atcgcccaggccaacgccgaagtgactgacggccgtttgtccggcgatctggtgtcgtgt
cgccacaagggcgagttttcgctgtcgaccaccgatcaggtgcagtacatggacatcgcg
ccgggccagatcgtgtcggttgccgcgtcgctgattccgttcctcgagcacgacgacgcc
aaccgcgcgctgatgggcgcgaacatgcagcgtcaggccgtgccctgcctgcggcccgag
aaatgcctggtgggtaccggcatggagcgcaccgttgcggtcgactccggcaccgccgtg
caggccctgcgcggtggcgtggtcgattacgtcgacgccaaccgcatcgtggtacgtgtg
catgacgacgagacgctctccggcgaggtcggcgtcgacatctacaacctcatcaagtac
acgcgctcgaaccagaacaccaatatcaaccagcgtccgatcgtcaaggtcggtgacgtg
ctggccaagggtgacgtgatcgccgatggcgcgtccaccgacctgggcgagcttgcgctc
ggccagaacatgctggtcgcgttcatgccgtggaacggttacaacttcgaggactcgatc
ctgatctcggagcgcgtcgtcgccgaagaccgtttcacctcggtgcatatcgaggagctg
acggtggtcgcgcgtgacaccaagctcggacccgaggagatcacgcgcgacatcgcctcg
ctgggcgaagcgcagatggggcgcctggacgagtccggcatcgtctacatcggtgccgag
gtgcaggccggcgacgtgctcgtcggcaaggtcacgcccaagggcgagacccagctcacg
ccggaagagaaactgctgcgcgcgatcttcggcgagaaggcgtccgatgtgaaggacacc
tcgctgcgcgtgccctcgggcatggtcggcaccgtcatcgacgtgcagatcttcacccgc
gaaggcatcgagcgcgacaagcgtgcgcagtcgatcatcgacgacatgctgcgcggcttc
aagaccgatctggccgaccagatgcgcattgtcgagcgtgacgccttcgcgcgtatccgt
cgcctgatcgtgggccagaaggtcaacggcgggccgaagaagctcgccaagggcgccaag
gtcaccgacgagtatctcgacgggctcgagccgcacagctggttcgacatccgcatggcc
gacgaggaactggcgacccagctcgaagccgtgcgcgacggtctggacaagacgcgcaag
gacttcgacgcggccttcgagttgaagaagaagaagctcacccagggcgacgaactgccg
ccgggcgtgcagaagatggtcaaggtgcacctggcggtcaagcgccgcctgcagccgggc
gacaagatggccggtcgccacggaaacaagggtgtggtctcgcgcatcgtgccggtcgag
gacatgccctacatggatgacggtacgccggtcgacgtcgcgctaaacccgctgggcgtg
ccctcgcgcatgaacatcggtcagatcctcgagacccacctgggtcgtgcggccaagtcg
ctcggtcagaagatcgacggcatgctgcgcgccaacgccaaggtcgccgagatccgcgcc
ttgctcgacgagatctacaaccgcagtggcaagaccgaggatctcgcgtcgttcagcgac
gacgacgtgatcgaactggcgaagaacctgcgcaacggcgtgccgttcgccaccccggtg
ttcgacggcgcccaggaggacgagatcgagaagatgttcgaactcgccggcctcgattcg
ggtggtcaggtcacgctctacgacggccgcacgggcgacgccttcgaccgcaaggtcacg
gtcggatacaagcacgtgctcaagctgcaccaccttgtcgacgacaagatgcacgcgcgt
tcgaccggcccgtactcgctcgtcacccagcagccgctgggaggcaaggcacagttcggt
ggccagcgcttcggcgagatggaggtgtgggcgctggaagcctacggcgccgcctatacg
ctgcaggagatgctcaccgtcaagtcggacgacgtcacgggccgcaccaaggtctacgag
aacatcgtcaagggtgaacacaagatcgatgccggcatgcccgagtccttcaacgtgctg
gtgaaggaaatccgctcgctcgcgatcgacatcgatctggacagctactga
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integrated database retrieval system
