Pseudazoarcus pumilus: C0099_04350
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Entry
C0099_04350 CDS
T05265
Name
(GenBank) pyridoxal-dependent decarboxylase, exosortase A system-associated
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
atw
Pseudazoarcus pumilus
Pathway
atw00300
Lysine biosynthesis
atw00470
D-Amino acid metabolism
atw01100
Metabolic pathways
atw01110
Biosynthesis of secondary metabolites
atw01120
Microbial metabolism in diverse environments
atw01230
Biosynthesis of amino acids
Module
atw_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
atw00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
C0099_04350
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
C0099_04350
Enzymes [BR:
atw01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
C0099_04350
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AUN94239
UniProt:
A0A2I6S4Q9
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All DBs
Position
complement(905339..906547)
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AA seq
402 aa
AA seq
DB search
MDQFAVRDGELVVGGLSLSELAAHAGGTPFFAYDRALLDARMRELRETLPARIELHYAIK
ANPHPELVRHLAARVDGLDVASGGELALALQAGCSAAAISFAGPGKSRDELEAAVAAGVL
LNIESHREARELADIAARGGRAARVAVRVNPDFELKSSGMRMGGGAKPFGVDAEAVPALL
GEINRMGLAFEGFHIFAGSQNLRADAIVEAQRLSFELAVRLAEHASAPVRVLNLGGGFGI
PYFPGDSRLDLAPIADNLATLLDEADTRLPGASLALELGRYLVGEAGVYVCRVVDRKESR
GQVFLVCDGGLNHHLAASGNFGQVIRKNFPVAIGNRMDAPRTLVANVVGPLCTPLDVLAE
RMTLADAQPGDLVVVFQSGAYGATASPQAFLGHPAPVEMLVG
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggaccagttcgcggtgcgcgacggcgaactggtcgtgggcggcctgtcgctgagcgag
ctggccgcacatgctggtggcacgcccttcttcgcctacgaccgcgccctgctcgacgca
cgcatgcgcgaactgcgcgagaccctgcccgcgcgcatcgagctgcactacgccatcaag
gccaacccccatcccgagctggtacgccacctggccgctcgcgtcgacgggctggacgta
gcctctggcggagaactcgcgctggccctgcaggccggctgcagcgcggccgcgatcagc
ttcgccggcccgggcaagtcgcgcgacgaactcgaggccgcggtcgcggccggcgtgctg
ctcaacatcgaatcgcatcgcgaggcgcgcgaactggccgacatcgccgcacgtggcgga
cgcgccgcgcgcgtggcggtgcgcgtcaatcccgacttcgaactcaagagttcgggcatg
cgcatgggcggcggcgccaagcccttcggcgtcgatgccgaggccgtccccgcgctgctc
ggcgaaatcaaccggatgggcctggccttcgagggcttccacatcttcgccggctcgcag
aacctgcgcgccgacgccatcgtcgaggcgcagcggctgtccttcgaactggccgtgcgt
ctggccgaacacgcgagcgcgccggtgcgcgtgctcaatctcggcggcggtttcggcatt
ccctactttccgggcgacagccgcctcgatctggcacccatcgccgacaatctagcgacg
ctgctcgatgaggcggacacacggctgcccggtgccagtctcgcgctcgaactcggccgc
tatctggtgggtgaggccggcgtatatgtgtgccgtgttgtcgaccgcaaggaatcgcgc
ggtcaggtcttcctggtgtgcgacggcggactcaaccaccacctggccgcctcgggcaat
ttcgggcaggtcatccgcaagaacttcccggtggccatcggcaatcgcatggacgcgccg
cgcacgctcgtggcgaacgtggtgggcccgctgtgcacgccgctggacgtactcgccgag
cgcatgacgctggcggacgcgcagccgggcgatctggtggtggtgttccagtctggcgcc
tatggcgcaacggccagcccacaggccttcctggggcatccggcgccggtggaaatgctc
gtgggctag
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