KEGG   Pseudazoarcus pumilus: C0099_04560
Entry
C0099_04560       CDS       T05265                                 
Name
(GenBank) DNA helicase II
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
atw  Pseudazoarcus pumilus
Pathway
atw03420  Nucleotide excision repair
atw03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:atw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    C0099_04560
   03430 Mismatch repair
    C0099_04560
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:atw03400]
    C0099_04560
Enzymes [BR:atw01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     C0099_04560
DNA repair and recombination proteins [BR:atw03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     C0099_04560
   MMR (mismatch excision repair)
    Other MMR factors
     C0099_04560
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PcrA_UvrD_tudor AAA_12 Viral_helicase1 AAA_22 AAA_30 T6SS_FHA_C
Other DBs
NCBI-ProteinID: AUN94276
UniProt: A0A2I6S4U2
LinkDB
Position
946539..948722
AA seq 727 aa
MSDLLVNLNSEQLQAVSLPPQHALILAGAGSGKTRVLTTRIAWLIQTGQVEPSGVLAVTF
TNKAAREMLARLSAMLPINTRGMWVGTFHGLANRLLRAHWRDANLPQLFQILDSADQLAA
IKRLLKALNVDDEKFPPRELQHFINGQKEAGLRAHAVEAWDDYTRRRVELYQEYEAQCQR
EGVVDFAELLLRSYELLERHEPLRRHYQSRFRHILVDEFQDTNRLQYRWLRQFADEGREG
AAAMFCVGDDDQSIYRFRGADVGNMRDFEREFRVANVIRLEQNYRSHGNILDAANAIIRN
NANRLGKNLWTEQGEGEPIRVFEGYADVDEARWVVEEIGQLVRDGMSRSDIALLYRSNAQ
SRVLEHQLFSSGIPYRVYGGLRFFERQEVKHALAYLRLIANPDDDTSFARVVNFPTRGIG
ARSQEALTDAARTFNASLYSTVPHLSGKPGAVLAGFVRLIEDLRRDTAKLPLPELVDHVL
DTSGLRAHYRNEKEGQDRLENLDELVSAAANFLAEIGPPEDPDADHALLADFLAHASLEA
GDHQAEAGADAVQLMTVHSAKGLEFDVVFATGLEEGLFPHENSLLETDGLEEERRLMYVA
VTRARERLYLSFAQSRMLHGQSRYNLKSRFLEEIPETLLKWLTPQRAATMPGNTYFRPSA
ASPAAAPPPRRRDDGGLRVGQLVGHARFGQGVIVATEGAGSDARVQVNFGAAGVKWLLLS
VAKLEVA
NT seq 2184 nt   +upstreamnt  +downstreamnt
atgtccgatcttctcgtcaatctcaattccgaacagctgcaggcggtgagcctgccgccg
cagcacgcactgattctggccggcgcgggttcgggcaagacgcgtgtgctcaccacgcgc
atcgcctggctgatccagaccggtcaggtcgagccgtccggcgtgctcgccgtgaccttc
accaacaaggccgcgcgcgagatgctcgcgcgcctgtcggcgatgctgccgatcaatacc
cgcggcatgtgggtcggcaccttccacggtctggccaatcggctgctgcgcgcgcactgg
cgcgacgccaacctgccgcaactgttccagatcctcgattcggccgatcagctcgccgcc
atcaagcgactgctcaaggcgctcaacgtcgacgacgagaaattcccgccgcgcgaactg
cagcacttcatcaacggccagaaggaggccggcctgcgcgcacatgcggtcgaggcctgg
gacgactacacgcgccgccgcgtcgagctctaccaggaatacgaggcgcaatgtcagcgc
gagggcgtggtcgatttcgccgagctgctgttgcgcagctacgagttgctcgaacgccac
gagccgctgcgccgccattaccagagccggtttcggcacatcctggtcgatgagttccag
gacaccaaccgcctccagtaccgctggctgcgccagttcgccgacgaagggcgcgaaggc
gcggcggcgatgttctgcgtcggcgacgacgaccagtcgatctaccgcttccgcggtgcc
gatgtgggcaacatgcgcgacttcgagcgcgagtttcgcgtcgccaacgtgatccggctg
gagcagaactaccgctcgcacggcaacatcctggacgcggccaacgccatcatccgcaac
aacgccaaccggctcgggaagaacctgtggaccgagcagggcgagggcgagccgatccgc
gtgttcgagggctacgccgatgtggacgaggcgcgttgggtggtcgaggaaatcggacag
ctcgtgcgcgacggcatgagccgttcggacatcgcgctgctgtaccgctcgaacgcgcag
tcgcgtgtgttggaacaccagctcttttcgtcgggcattccctaccgcgtgtatggtggc
ctgcgcttcttcgagcgtcaggaggtcaagcatgcgctggcctatctgcgtctgatcgcc
aacccggacgatgacacctcgtttgcgcgcgtcgtcaacttccccacgcgcggcatcggt
gcgcgctcgcaggaagcgctgacggacgccgcgcgcaccttcaatgccagcctgtattcg
accgtgccgcacctgtcgggcaagcccggcgcggtgctggccggcttcgtgcgcctgatc
gaggacttgcgccgcgacacggccaagttgccgctgccggaactggtcgaccacgtgctc
gacacctccgggctgcgcgcgcactaccgcaacgagaaggaaggccaggaccggctcgag
aacctcgacgaactggtcagcgcggccgccaacttcctcgccgagatcggcccgccggaa
gaccccgatgcggatcacgcgctgctggcggactttctcgcccacgcctcgctcgaggcc
ggcgaccaccaggccgaggccggggccgacgcggtgcagttgatgacggtgcattcggcc
aagggcctggagttcgacgtggtcttcgccaccggtctggaggaaggcctgttcccgcac
gagaacagcctgctcgagaccgacgggctggaggaggagcgccgcctgatgtacgtggcg
gtgacgcgcgcgcgcgaacgcctctatctgtcgttcgcgcaaagccgcatgctgcatggg
cagtcgcgttacaacctgaagtcgcgctttctcgaggaaattcccgagacgctgctcaag
tggctgacgccacagcgtgccgcgacgatgccgggcaacacctatttccggccgtccgcg
gcctcgcctgcggcggctccgccgccgcgtcgccgcgacgatggcggcttgcgcgtgggc
caactggttggccatgcacgcttcggccagggcgtgatcgtcgccaccgagggcgccggg
tcggatgcgcgcgtgcaggtcaatttcggcgcggcgggcgtcaaatggctgctgttgtcg
gtggccaagctggaagtggcctga

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