Pseudazoarcus pumilus: C0099_04580
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Entry
C0099_04580 CDS
T05265
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
atw
Pseudazoarcus pumilus
Pathway
atw03030
DNA replication
atw03430
Mismatch repair
atw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
atw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C0099_04580
03430 Mismatch repair
C0099_04580
03440 Homologous recombination
C0099_04580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
atw03032
]
C0099_04580
03400 DNA repair and recombination proteins [BR:
atw03400
]
C0099_04580
Enzymes [BR:
atw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C0099_04580
DNA replication proteins [BR:
atw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C0099_04580
DNA repair and recombination proteins [BR:
atw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C0099_04580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Fox-1_C
Motif
Other DBs
NCBI-ProteinID:
AUN94280
UniProt:
A0A2I6S4U7
LinkDB
All DBs
Position
953295..956783
Genome browser
AA seq
1162 aa
AA seq
DB search
MDAPAPRFVHLRLHSEFSILDGIVRTDEAIRRAAADGMPALGISDLANLFGMVKFYKGAR
AAGVKPVVGVDVWIANEAERDKPCRVLLICRDRGGYGRLCELLARAYLENKHRGRAELRR
EWFDDGGGEGLICLSGAASGDIGQALVNGNPDAADVLARWWAARFPDAFYIELQRAGHSG
AEALVAESVQLAARLDLPVVATHPVQFMSPEDFMAHEVRVCIAQGYVLADKRRPRDFTPE
QYFKSQDEMCALFADLPEALDNAVAIAERCSLSVELGKNYLPQFPTPQGMTLDDFLVAEA
RAGLEVRLQELYPDAEERERQRPRYAERLDIETRTIIDMGFPGYFLIVADFINWAKENGV
PVGPGRGSGAGSLVAYSLRITDLDPLEYALLFERFLNPERVSMPDFDIDFCQDNRYRVIE
YVRERYGKEAVSQIATFGTMASKAVVRDVGRVLDLPYGLCDRLSKLVPLEANKPVSLARA
YEMEPQIGEMMADGNDGESVQELWRLAEPLEGLSRNVGMHAGGVLIAPGRLTDFCPLYIA
DGEDATPVSQFDKDDVEAVGLVKFDFLGLRNLTIIDLAVDYVERLTGERPDLNSLPFTDP
AAYRILKDANTTAIFQVESDGMKKLLKKLGPDRFEDIIAVLALYRPGPLGSGMVDDFILR
KKGQQEIDYFHPDLKPCLEPTYGVIVYQEQVMQISQIIGGYTLGGADMLRRAMGKKKASE
MARHREIFRDGAKKKGYDEQLAMQLFDLMEKFAEYGFNKSHTAAYAVVTYHTAWLKAHHC
AAFMAATLSSDLDNTDTIRIFFEDAVANGITVLPPDVNASEYRFVPVDANTIRYGLGAVK
GCGEPAMRSIEAARASRPFHDLFDFCERVDRRMVNRRAVEALIRAGALDTLDGHAGRDRA
QLLATVALAMEAAEQKAANALQGGLFDALPEAAGAAPAFASVRAWSERERLKEEKTAIGF
FLSGHPFNSFSGEVRRFVRRTLAQLEPSREPSMLAGVVMDARTKVGQRGKMAFVQIDDGT
GAREVAVYSEVLDASRGKIVTDEVLIVEGRISNDEYSGGLRIIADRLMTLGEARARFATA
LQLSLNGEVGEAGGATAAADRLQGLLAPFRDGGCPVRLRYRNEVAEVELPLGENWSVRPD
DALLDGLRAWLPDDAVEVLYRS
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atggacgcccccgcaccccgcttcgtacatcttcgcctgcactccgagttctcgatcctc
gacggcatcgtccgcaccgacgaggcgatccgccgcgccgcggccgacggcatgccggcg
ctgggcatctccgacctggccaacctgttcggcatggtcaagttctacaagggcgcgcgc
gcggccggcgtcaagccggtggtcggcgtcgacgtgtggatcgccaacgaggccgagcgc
gacaagccttgccgtgtgctgctcatctgccgtgaccgtggcggctacgggcggctgtgc
gaactgctcgcgcgcgcctatctggaaaacaagcatcgcggacgcgccgaactgcgccgc
gagtggttcgacgacggcggtggcgaggggctgatctgcctgtccggcgcggcttcgggc
gacatcggtcaggcgttggtcaacggcaacccggacgcggccgatgtgctcgcgcgctgg
tgggctgcgcgtttccccgacgccttctacatcgaattgcagcgcgccggtcacagcggc
gccgaggcgctggtggccgaatcggtgcaactggccgcgcggctggacctgccggtggtg
gcgactcacccggtgcagttcatgtcgcctgaggacttcatggcgcacgaggtgcgcgtg
tgcatcgctcagggctacgtgctggccgacaagcgccgtccgcgcgatttcacgcccgag
caatacttcaagagccaggacgagatgtgcgcgctgttcgcggatctgcccgaagcgctg
gacaacgccgtggccatcgccgagcgctgctcgctgtcggtcgagctgggcaagaactac
ctgccgcagttccccacgccccaaggcatgacgctcgacgatttcctcgtcgccgaggcg
cgcgcaggcctggaagtgcgcctgcaggaactctatccggatgcagaagagcgcgagcgc
cagcgcccgcgctacgccgagcggctcgacatcgagacccgcaccatcatcgacatgggc
tttccgggctacttcctgatcgtcgcggacttcatcaactgggccaaggaaaacggcgtt
ccggtggggccggggcgtggttcgggcgccggctcgctggtcgcctacagcctgcggatc
acggatctggacccgctcgagtacgcactgctgttcgagcgcttcctcaaccccgagcgc
gtgtcgatgcccgacttcgacatcgacttctgccaggacaaccgctaccgcgtcatcgaa
tacgtgcgcgagcgctatggcaaggaggcggtgagccagatcgccactttcggcacgatg
gcgtcgaaagccgtggtgcgcgacgtgggtcgcgtgctcgacctgccctatggactgtgc
gaccggctctccaaactggtgccgctcgaggccaacaagcccgtgtcgctggcgcgcgcc
tacgagatggagccgcagatcggcgagatgatggccgacggcaacgacggcgaatccgtg
caggagctgtggcggctcgccgagccgctcgaaggcctgtcgcgcaacgtcgggatgcac
gccgggggcgtgctcatcgcgccggggcggctgaccgacttctgcccgctctacatcgcc
gacggcgaggatgccacgccggtgtcgcagttcgacaaggacgacgtcgaggcggtgggc
ctggtgaagttcgacttcctcggtctgcgcaacctgaccatcatcgaccttgcggtcgat
tacgtcgaacgcctcaccggcgagcggcccgacctcaattcgctgcccttcaccgacccg
gccgcgtacaggatcctcaaggacgccaacaccacggcgatcttccaggtcgaatcggac
ggcatgaagaagcttctcaagaagctcggccccgaccgcttcgaggacatcatcgcggtg
ctggcactgtatcgtccgggcccgctgggttcgggcatggtggatgacttcattctgcgc
aagaagggccagcaggagatcgactacttccacccggatctgaagccctgcctggagccg
acctacggcgtcatcgtgtaccaggagcaggtgatgcagatctcccagatcatcggggga
tacacgctgggcggcgccgacatgctgcgccgcgcgatgggcaagaagaaggcctcggaa
atggcccgccatcgcgagatcttccgcgacggcgcgaagaagaagggctacgacgagcag
ttggcgatgcagctcttcgacctgatggagaaattcgccgagtacggcttcaacaagtcg
cacacggccgcctacgccgtcgtcacctaccacacggcctggctcaaggcgcaccactgc
gcggccttcatggccgcgacgctgtcctccgacctggacaacaccgacaccatccgcatc
ttcttcgaggacgcggtggccaacggcatcaccgtgctgccgcccgacgtcaacgcctcc
gaataccgtttcgtgccggtcgacgcgaacaccattcgctacggtctgggcgcggtcaag
ggctgcggtgagccggcaatgcgctcgatcgaggcggcgcgggcgagcaggcccttccac
gacctgttcgatttctgcgagcgcgtcgaccgccgcatggtcaatcgccgcgcagtcgag
gcgctgatccgcgcaggtgcgctcgataccctcgacgggcatgccgggcgtgatcgcgcg
cagttgctcgcgaccgtcgcgctggccatggaagcggccgagcagaaggcggccaacgcc
ttgcagggcgggctgttcgacgcgttgccggaagcggccggtgcggcgccggcgttcgct
tcggtgcgcgcctggagtgaacgggaacgactcaaggaggaaaagaccgcgatcggcttc
ttcctgtccggtcatccgttcaattcgttcagcggcgaagtgcggcgtttcgtgcgccgc
acgctggcgcaacttgagccctcgcgcgagccctcgatgctcgccggcgtggtcatggac
gcgcgcaccaaggtcggccagcgcggcaagatggccttcgtgcagatcgatgacggaacc
ggggcgcgcgaagtcgcggtgtattccgaggtgctcgatgcgtcgcgcggcaagatcgtc
accgacgaggtgctgatcgtcgaggggcgcatcagcaacgacgagtattcgggggggcta
cgcatcatcgccgaccgcctgatgaccctgggcgaggcgcgcgcgcgcttcgccactgcc
ttgcagctgagcctcaacggcgaggtcggcgaggccggtggcgccaccgccgcggccgac
cgtctgcagggactgctcgcgccattccgcgacggcggttgcccggtgcgcttgcgctac
cgcaacgaagtggccgaggtcgaactgccgctgggcgagaactggagcgtgcgcccggac
gacgcactgctcgatggcctgcgcgcgtggttgccggatgatgcggtggaagtgctctac
cgcagctga
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