Pseudazoarcus pumilus: C0099_07590
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Entry
C0099_07590 CDS
T05265
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
atw
Pseudazoarcus pumilus
Brite
KEGG Orthology (KO) [BR:
atw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
atw03016
]
C0099_07590
Enzymes [BR:
atw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
C0099_07590
Transfer RNA biogenesis [BR:
atw03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
C0099_07590
Prokaryotic type
C0099_07590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AUN94808
UniProt:
A0A2I6S6D4
LinkDB
All DBs
Position
1577287..1578219
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AA seq
310 aa
AA seq
DB search
MKVNRPPRRIPRERIDGVLLLDKPQGLSSNGALQAAKRLLNAAKAGHTGTLDPLATGLLP
LTFGEATKFSQTLLDADKEYEATIRLGFETDSGDAEGSIVSTASVAVGAAALESALEPLR
GEIEQIPPMHSALKRDGKPLYEYARAGIEIERAPRRVSIHRLDVLAFEGTDVRVSVRCSK
GTYIRSLAIDLGRALGCGAHLSALRRTAIGPFGVADALTLDALEAESAPTRRTLLAPPDR
LLACPSLELEDGQAQAILQGRALHAASALAGPVRLHCRHRFLGLGEVGPDGTLRARRLVA
ADPAEFAPHD
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
attaaggtgaatcgtcccccacgcagaattccgcgcgagcgcatcgacggtgtactgctg
ctcgacaagccgcaggggctcagctccaacggtgcgctgcaggcggccaagcggctgctc
aacgccgccaaggccgggcataccggtacgctcgatccgctggccaccgggctgttgccg
ctgactttcggcgaggcgacgaagttctcgcagacgctgctcgatgctgacaaggaatac
gaggcaacgatccgcttaggcttcgaaaccgatagcggtgacgcagagggtagcatcgtc
tcgacggcctccgtcgccgtcggggcggcagcgctggagtccgcgctggagcccttgcgc
ggcgagatcgagcagattccgccgatgcattcggcgctcaagcgcgatggcaagccgctg
tacgagtacgcacgcgccggcatcgagatcgagcgtgccccgcggcgagtgagcatccac
cgtcttgatgtgctggccttcgagggaaccgatgttcgcgtgtcggtgcgatgcagcaag
ggcacctacatccgcagcctggcgatcgatctgggccgggcgctcggctgcggcgcgcat
ttgagcgcattgcggcgcaccgcgatcggtcccttcggcgtggccgatgcgctcaccctc
gacgcgctcgaagccgaatccgcgccgacgcgccggacgctgctcgcgccacccgaccgg
ctgctcgcgtgtccgtcgctggaactcgaggacgggcaggcgcaggccatcctgcagggc
agggcgctgcatgcggcatccgccctggccggtccggtgcgcctgcattgcaggcaccgc
ttcctcggcctcggcgaggtcggcccggacggcaccttgagggcacggcgactggtggcg
gccgaccccgccgaatttgccccgcacgattga
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