Pseudazoarcus pumilus: C0099_10295
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Entry
C0099_10295 CDS
T05265
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
atw
Pseudazoarcus pumilus
Pathway
atw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
atw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C0099_10295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atw03019
]
C0099_10295
03009 Ribosome biogenesis [BR:
atw03009
]
C0099_10295
Enzymes [BR:
atw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
C0099_10295
Messenger RNA biogenesis [BR:
atw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
C0099_10295
Ribosome biogenesis [BR:
atw03009
]
Prokaryotic type
rRNA helicases
C0099_10295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
HTH_22
Motif
Other DBs
NCBI-ProteinID:
AUN95285
UniProt:
A0A2I6S7Q1
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All DBs
Position
2129349..2131163
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AA seq
604 aa
AA seq
DB search
MTTTLSSFKELDLGAPLLAALDDVGYETPSPIQAACIPPLLAGADIIGEAQTGTGKTAAF
ALPCLARIDLSDNRPQVLVLAPTRELAIQVSEAFQRYARNMPGFNVMPVYGGQSMVVQLR
QLKRGAHVVVGTPGRIMDHIERKSLVLDNLKTLVLDEADEMLRMGFIDDVEWILGHTPAE
RQTALFSATMPEPIRRIAHRYLRDPQEVKIKAATTTVSTITQKFCQVSVPHKLDALTRIL
EIEDMDAGIIFVRTKVATEELATRLEARGHAVGALNGDMTQQLRERVVEQLKRGALDLVV
ATDVAARGLDVSRITHVINYDIPYDTEAYVHRIGRTGRAGRLGTAILFVTPREQRMLKSI
ERATRQKIEPLPLPSREAIADRRISLFREQVEAVLQSDDLDFFREVVASLEADGTHELHD
IAAALAHMATRDRPLQLPNEGGRDFANAAPSPRTDREPRENREKILERRRDYADGKLSRY
RIAVGKHQLVTPKDIVGALANEGGIESRFIGQINLYEDYSTVELPADLPNDVMGALARLR
VRQHVLHLRPVTPDENAHDERRARTPRSTPSSERKPRKSFDKPARSKPARADSGDRPPRA
RKKF
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgactaccaccctatccagcttcaaggaactcgacctcggcgccccgctactcgcggcg
ctcgacgacgtcggctacgaaaccccgtcccccatccaggccgcgtgcatcccgccgctg
ctcgcaggcgccgacatcatcggcgaagcgcagaccggcaccggcaagacggccgcattc
gcgctgccctgcctggcccgcatcgacctgtccgacaaccgcccgcaggtactggtgctc
gcacccacgcgcgaactggccatccaggtgtcggaagccttccaacgctacgccaggaac
atgcccggcttcaacgtgatgccggtgtacggcggtcagagcatggtcgtgcagttgcgc
cagctcaagcgcggcgcccacgtcgtggtcggcacgccgggccgcatcatggatcacatc
gagcgcaagagcctggtgctcgacaacctcaagacgctggtgctcgacgaagccgacgag
atgctgcgcatgggcttcatcgacgacgtcgaatggatcctcggccacaccccggccgag
cgccagaccgcgctgttttcggcgaccatgccggaaccgatccgccgcatcgctcaccgc
tacctgcgcgacccgcaggaagtgaagatcaaggccgccaccaccacggtgtcgaccatc
acgcagaagttctgccaggtcagcgtgccgcacaagctcgacgcgctcacccgcatcctc
gagatcgaggacatggacgccggcatcatcttcgtgcgcaccaaggtcgccaccgaagag
ctggccacccgcctcgaagcacgcggccacgccgtcggcgcgctcaacggtgacatgacc
cagcaactgcgcgagcgcgtggtcgaacaactcaagcgcggcgcgctcgacctggtcgtc
gccaccgacgtcgccgcgcgcggtctggacgtgtcgcgcatcacgcacgtcatcaactac
gacatcccctacgacaccgaagcctacgtgcatcgcatcgggcgcaccggccgcgccggt
cgtctgggcacggcgatcctcttcgtcacgccacgtgagcagcgcatgctcaagagcatc
gagcgggccacccgccagaagatcgagccgctgccgctgccctcgcgcgaggccatcgcc
gaccgccgcatctcgctgttccgcgaacaggtcgaggccgtgctgcaatccgacgacctg
gacttcttccgtgaagtcgtcgccagtctcgaggccgacggcacgcacgaactgcacgac
atcgccgccgcgctggcccatatggccacgcgcgaccgtccgctgcagttgcccaatgaa
ggcgggcgcgattttgccaatgcggctccgtcgccgcgcaccgatcgcgaaccacgcgaa
aaccgcgaaaagattctcgaacgccgccgcgactacgccgacggcaagctctcgcgctac
cgcatcgcggtgggcaagcaccagctcgtcacccccaaggacatcgtcggcgcgctcgcc
aacgaaggcggcatcgagtcgcgcttcatcggtcagatcaacctctacgaggattactcg
accgtcgaacttccggccgatctgcccaacgacgtgatgggcgcgctcgcacgtctgcgc
gtgcgtcaacacgtgctgcacctgcgtccggtcacgcccgacgagaacgcacacgacgaa
cggcgtgcgcgcacgccgcgaagcacgccgtcatccgagcgcaagccgcgcaaatccttc
gacaagccggcccgcagcaagcccgcacgcgccgacagcggcgaccgccccccgcgcgcg
cgcaagaagttctga
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