Pseudazoarcus pumilus: C0099_10520
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Entry
C0099_10520 CDS
T05265
Name
(GenBank) DNA repair exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
atw
Pseudazoarcus pumilus
Brite
KEGG Orthology (KO) [BR:
atw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atw03400
]
C0099_10520
DNA repair and recombination proteins [BR:
atw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C0099_10520
Archaeal homologous recombinant proteins
C0099_10520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
GTP_EFTU
AAA_21
NACHT
GAGA_bind
nSTAND3
ABC_tran
FtsK_SpoIIIE
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AUN95324
UniProt:
A0A2I6S7T6
LinkDB
All DBs
Position
complement(2166880..2169594)
Genome browser
AA seq
904 aa
AA seq
DB search
MKPLILTMQAFGPFAGRERVDFTRLGERALFLIHGATGAGKTTLLDALCFALYGDTSGGE
RDARAMRSDLAPAELETEVELEFALGAERYRVTRKPAQQRPRKRGEGWMQAQPEAQLDRL
TDGEWKSLATQPGKVLDAVRGLLGFDSAQFRQVIVLPQGRFRELLTAGSGEREAILETLF
RTRICSDLSDALRERARALEVAGRETQTRRETLLQHADCDSVDALKTRRAQLAGEVEQRR
VEEKAARERDAAARLALERARVAVQAERERAQAAQRLQEAARQREAVAQAQAQADARLAT
ENARTPEREALAKRLNELEALLPAVTDLAQALARRDAAAKQRDAAGAERERGEAALAAAR
KTLQTRRDEREQVQALAARVEVLAHRLKDAQAARERLARLAQLRKDLAGAEGRLSEAAKA
VTAADAALADAQRRQDDVEHAWSAAQAGLLAAGLQAGAPCPVCGGTDHPAPARASTDAVS
EAALREAREAVRKAATAREAALLRRHEADKQAEGLRATAGELERDPADAADPAALQAELK
AAQSAAQRLAELARELPACEQAIGEAEKAVRKAEAARQSAEGEVTRADTEAALLQRKLPQ
ELNTVAALEAEIARVRAARRALDEALAQAQQAAQQVANELAAARSAEQAAEEVLQRATQA
AQAAAVEGGAPDLPAVEAAARSAGEALEAALLATRDAAGRVEAADRTLAALSELAAQAGE
LERQYAVAGRLAEVAGGGNRLNLSFQRFVLATLLDEVLEAASLRLLRMSRSRFELRRVQG
LVDGRRAGGLDLEVFDHYTGSSRPAATLSGGEGFLAALSLALGLADVVQSRAGGMQMETL
FIDEGFGTLDPEALDFALSTLIDLQQAGRLVGVISHVAELRERMDVRLEVIAGAAGSHVR
LRQP
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgctgatcctcaccatgcaggccttcggtccgttcgccgggcgcgagcgcgtg
gatttcacgcggctgggcgagcgcgcgctgtttctcatccacggcgccaccggcgccggc
aagaccacgctgctcgacgccctgtgcttcgcgctgtacggcgacacctccggcggcgag
cgtgacgcacgcgcgatgcgcagcgacctcgccccggctgaactcgaaaccgaggtcgaa
ctggaattcgcgctcggcgccgagcgctaccgcgtcacgcgcaagcccgcccagcaacgg
ccgagaaagcgcggcgagggctggatgcaggcgcagcccgaggcgcagctcgatcgcctc
acggacggtgaatggaaaagcctcgccacccagcccggcaaggtgctcgatgccgtgcgc
ggcctgctcggcttcgacagcgcgcagtttcgtcaggtcatcgtgctgccgcaggggcgc
ttccgcgaactgctcacggccggctccggcgagcgcgaggccattctcgaaaccctgttc
cgtacccgcatctgcagcgatctgagcgacgcgctcagggagcgcgcccgcgcgctcgaa
gtcgccggccgcgagacgcagacgcggcgcgagaccttgttgcagcatgccgattgcgac
agcgtggatgcgctcaagacgcggcgcgcgcaactggcgggcgaggtcgagcaacgccga
gtggaggagaaggccgcccgcgaacgcgacgccgctgcccgcctcgcgctcgagcgcgct
cgcgtcgccgtgcaggccgagcgcgaacgtgcgcaggccgcgcagcgcctgcaggaggcc
gcacgccagcgcgaggccgttgcacaagctcaggcgcaggccgacgcgcggctggcgacg
gaaaacgctcgcacacccgagcgtgaggcgctggccaaacgcctcaacgaactcgaagcc
ctgctgccggccgtcaccgatctggcgcaggccctggcgcgccgcgacgcggcggcaaag
cagcgcgacgcggccggcgccgagcgcgagcgtggggaggctgcactcgcggccgcgcgc
aagacgctgcagacgcggcgtgacgagcgtgagcaagtgcaggcgctggcggcgcgtgtc
gaagtgttggcgcaccgcctcaaggatgcgcaggccgcgcgcgagcggctggcgcggctc
gcgcaactgcgcaaggatctggccggtgccgagggtcggctgagcgaggccgcgaaggca
gtgacggcggccgacgccgcgctggccgacgcgcagcgtcggcaggacgacgtcgaacac
gcctggagcgcggcgcaggcgggtctgctcgccgccggcctgcaggccggtgcgccctgt
ccggtgtgcggcggcacggaccatcctgcgccggcgcgagcgagtaccgatgcggtttcc
gaggccgcgctgcgcgaggcccgcgaggcggtgcgcaaggcggcgaccgcgcgcgaggcg
gcgctattgcgccgtcacgaggccgacaagcaggcggaggggctgcgcgcgacggccggc
gagctggagcgcgatccagccgatgcggcggatccggccgccttgcaggccgaattgaag
gcggcacagtcggccgcgcagcggctggcggaactggcgcgcgaattgccggcctgcgag
caggctattggtgaagccgagaaagcggtgcgcaaggccgaggccgcgcgccagagcgcc
gagggcgaggtgacgcgggccgatacggaagccgccctgcttcagcgcaagctgccgcag
gaactgaacacggttgctgcgctggaggcggaaatcgcgcgcgtgcgggccgcacgccgc
gcgctcgacgaggcgctcgcacaggcgcagcaggccgcgcaacaagtggccaacgaactg
gccgccgcgcgttcggcggaacaagcggccgaagaagtcctgcagcgcgcgacgcaggcc
gcgcaggcggccgccgtggaaggcggcgcgccggacctgccggccgtggaggctgccgcg
cgttcggcgggcgaggcgctggaagcggcgctgctcgccacgcgcgatgcggcgggccgg
gtggaggcggcggaccgcacgctggccgcgctgtccgagctggcggcgcaggccggagaa
ctggagcggcagtacgcggtggcggggcggctggccgaggtggcgggcggaggcaatcgc
ctcaacctgagtttccagcgcttcgtgctggccaccttgctcgacgaggtgctggaggcc
gcgtcgctgcgcctgctgcgcatgagtcgtagtcgcttcgaactgcgccgcgtgcaggga
ctggtcgacgggcgtcgcgccggcgggctggatctggaggtgttcgaccactacaccggc
agcagccggccggcggccacgctgtcgggcggcgagggctttctggccgcgctgtcgctg
gcgctggggctggccgacgtggtgcagtcgcgcgccggcggcatgcagatggagacgctg
ttcatcgacgagggcttcggcacgctggacccggaggcgctggactttgcgctgtctacg
ctgatcgacctgcaacaggccgggcgactggtgggcgtgatctcgcacgtggccgaactg
cgcgagcgcatggacgtgcgcctggaagtaatcgccggcgcggccggcagccacgttcgg
ctgcgccagccgtga
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