Pseudazoarcus pumilus: C0099_11380
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Entry
C0099_11380 CDS
T05265
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
atw
Pseudazoarcus pumilus
Pathway
atw03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
atw00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
C0099_11380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atw03019
]
C0099_11380
03009 Ribosome biogenesis [BR:
atw03009
]
C0099_11380
Messenger RNA biogenesis [BR:
atw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
C0099_11380
Ribosome biogenesis [BR:
atw03009
]
Eukaryotic type
Pre-60S particles
RNases
C0099_11380
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AUN95475
UniProt:
A0A2I6S888
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Position
complement(2325752..2326303)
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AA seq
183 aa
AA seq
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MAQDSSRLIWLDMEMTGLEPDRDRIIEIAVVITDAALEVVAEAPVMVVHQSDAVLDAMDE
WNTRTHGQSGLTARVRAATEDEAAVEARMLEFIAAYVPERASPMCGNSICQDRRFMARYM
PRLEAWFHYRNLDVSTLKELARRWRPEVLESFKKSGRHEALADVHESIAELRHYREHFLR
LSD
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atggcacaggacagcagccgcctgatctggctggacatggaaatgaccgggctcgagccg
gaccgcgatcgcatcatcgagattgcggtggtgatcacggatgccgcgctcgaagtggtg
gccgaggcgccggtgatggtggtgcatcagagcgacgcggtgctcgacgcgatggatgag
tggaacacgcgcacacatggtcaatccggcctgaccgcgcgcgtgcgcgcggccaccgag
gacgaggcggcggtcgaggcgcgcatgctcgaattcatagccgcctacgttcccgagcgc
gcctcgccgatgtgcggcaactccatctgccaggatcgccgcttcatggcgcgctacatg
ccgcgcctggaggcgtggtttcactaccgcaacctggatgtgtccaccctcaaggagctg
gcgcgtcgctggcgccccgaggtgctcgagagcttcaagaagtccggccgccacgaggcg
ctggccgatgtgcacgaatcaatcgccgagttgcgccactatcgcgaacacttcctgcgc
ctgtcggactga
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