Pseudazoarcus pumilus: C0099_11865
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Entry
C0099_11865 CDS
T05265
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
atw
Pseudazoarcus pumilus
Pathway
atw02020
Two-component system
atw02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
atw00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
C0099_11865
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
C0099_11865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atw03021
]
C0099_11865
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
atw02035
]
C0099_11865
Transcription machinery [BR:
atw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
C0099_11865
Bacterial motility proteins [BR:
atw02035
]
Flagellar system
Flagellar assembly proteins
Stator
C0099_11865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
UPF0122
Alpha-E
Motif
Other DBs
NCBI-ProteinID:
AUN95564
UniProt:
A0A2I6S8I3
LinkDB
All DBs
Position
complement(2421839..2422597)
Genome browser
AA seq
252 aa
AA seq
DB search
MYDSEGNPDKGQLVELYAPLVKRIAFHLMAKLPSSVNIDDLMQNGMIGLLDAVDRYEDGA
AQFETYASQRIRGAMLDGLREDDWMPRSLRRDMRRVEAAVQTLEQRFGRAPNETELAGEI
GVPLPEYQQILQEARGHQLVYFEDFKSGEDEDFFEHHVVDQDADPLGLLEDADFRRALVS
AIGALPEREQLVMSLYYDEELNLREIGEVLGVTESRVCQLHSQAVARLRANVFGEGAPAP
AKRRGRPPRSKG
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgtacgactccgaaggaaatcccgacaaggggcaactggtagaactgtacgcgccgctg
gtcaagcgcatcgcctttcacctgatggcgaagctgccttccagcgtcaacatcgacgat
ctcatgcaaaacggcatgatcgggctgctcgatgccgtcgatcgctacgaggacggtgcg
gcgcagttcgagacctacgcctcgcagcgcatccgcggcgcaatgctcgacggattgcgc
gaggacgactggatgccgcgtagcctgcgccgcgacatgcgtcgcgtcgaggcagcggtg
cagacgctcgaacagcgcttcggtcgggcgcccaacgagaccgaactggctggcgagatc
ggcgtgccgctacccgaataccagcagatcctgcaggaggcgcgcggtcatcagctggtg
tatttcgaggacttcaagtccggcgaggacgaggacttcttcgagcatcacgtcgtcgac
caggatgccgacccgctggggctgctcgaggacgcggattttcgccgtgcgctggtgtcg
gccatcggtgcgctgcccgagcgcgaacaactcgtcatgagcctgtactacgacgaggaa
ctgaacctgcgcgagatcggcgaggtgctgggcgtgaccgagtcgcgtgtgtgccagctg
cacagccaggcggtggcgcgactgcgcgccaacgtgttcggcgagggcgcaccggcgccg
gccaaacggcgcggccgcccgccgcgctccaagggctga
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