KEGG   Acidithiobacillus thiooxidans: GCD22_00116
Entry
GCD22_00116       CDS       T06281                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
atx  Acidithiobacillus thiooxidans
Pathway
atx03030  DNA replication
atx03410  Base excision repair
atx03420  Nucleotide excision repair
atx03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:atx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    GCD22_00116 (polA)
   03410 Base excision repair
    GCD22_00116 (polA)
   03420 Nucleotide excision repair
    GCD22_00116 (polA)
   03440 Homologous recombination
    GCD22_00116 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:atx03032]
    GCD22_00116 (polA)
   03400 DNA repair and recombination proteins [BR:atx03400]
    GCD22_00116 (polA)
Enzymes [BR:atx01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     GCD22_00116 (polA)
DNA replication proteins [BR:atx03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     GCD22_00116 (polA)
DNA repair and recombination proteins [BR:atx03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     GCD22_00116 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     GCD22_00116 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1 DNA_pol_lambd_f
Other DBs
NCBI-ProteinID: QFX94670
UniProt: A0A5P9XLS8
LinkDB
Position
113896..116622
AA seq 908 aa
MPQDPRILVDASSFLYRAFHALPDLRAPDNLPTGAIFGVANMLRRLAKEYPSDEIIVVFD
APGGTFRDRLYPEYKAQRPAMPEDLRAQIPLLHEWIQATGLPLVLVPDVEADDVIGTLAG
SAQAGQQVIIVTGDKDMAQLVNDQVTLLDTMKGVKTDVAGVWERYGVAPERIADLLALTG
DKVDNIPGVPGAGPKTAAKWIQQYGSLDGVLAHADEIGGKIGEALRASLDYLPLSLDLTT
IRRNLHLPEQSYQRVPENTQKLRSLALRLGFHAWLKEYPAEPGTENNTEVSVNESAAGGL
MPIDRSRYRAITTPAALENLLQKLQQADLVALDTETTALDPLNADLVGISCAWQEGDQIE
AVYIPVGHRDDSTQLVLDHVLATLRPWLENPQAAKLAQNAKYDWRVFWRYDIHPAGLCRD
TLLESYILDSSQNNHDLDTLAQRHLQHQNITYEEVAGKGKAARNFADVPVSEALPYAAED
ADVCWRIDAQLWPRFANEAGLQRVLMDIEMPLVLVLARMEQAGVRVDKEQLKTLSMELGR
DMAACEAQAFKSAGQSFNLGSPKQIQEILFDKMQLPVLKKTPGGQPSTSEDVLAQLAVQA
DLPRLILEYRGMAKLKNTYADALPEMINPRTGRVHTHFQQAVAATGRLSSSAPNLQNIPV
RTEQGRRIRQAFVAEDGFYLLSADYSQIELRIMAHLSRDARLLQAFAEGQDIHAATAAEV
FNLAPEAVDSDARRAAKAINFGLIYGQTPYGLAQQLGIEQSAARAYMDRYFERYPGVLTY
MEQTRVLARQQGYVETLFGRRLYVPEIRSSNAARRNYAERAAINAPMQGTAADLIKKAMI
AVDAWLQETPARGRMILQVHDELILEVPESGLEAARAALKELMEGVADLAVPLLVGLGVG
KHWDAAHG
NT seq 2727 nt   +upstreamnt  +downstreamnt
atgccccaagaccctcgtattctcgttgacgcctccagtttcctgtaccgggcatttcat
gccctgccggacttgcgcgcgccggataatctgcctaccggggcgatattcggggtggcc
aacatgctgcggcgcctggcgaaagaatatcccagtgatgaaatcattgtggtttttgat
gctcccggagggacttttcgtgaccggctttatccggaatacaaagcccagcgtccagct
atgccggaggatttgcgcgcccagattccgctcctgcatgaatggattcaggcaaccggt
ctgccgctggtgctggtaccggatgtggaagccgatgatgtcatcgggacgctcgcgggc
tcggcgcaggcgggccagcaggtgattatcgtgacgggtgacaaggatatggcccagttg
gtcaatgatcaggtcaccctgctggataccatgaagggcgtcaaaaccgacgtggccggg
gtatgggaacgttatggcgtggccccggaacgtatcgccgatttactggcgcttacgggt
gacaaggtcgataacattccaggggtgcccggagcggggccgaaaacagcggccaaatgg
attcagcaatatggcagtctggatggcgttctggcccacgccgatgaaatcggtggcaaa
ataggcgaggcactgcgggcctctctggattatctgcccctcagcctggatctgaccacg
attcgccgcaatctccatttgccggagcaatcttatcaacgtgttcccgaaaacacccaa
aaattgcgcagcctcgccctacgcctgggctttcatgcctggctcaaggaatatccagcc
gaaccgggtaccgagaataataccgaggtttcggtaaatgaaagcgctgcggggggattg
atgcccattgatcgcagccgttatcgggcgattacgacccccgcagcactggaaaacctg
ctgcaaaagctgcagcaggcggacttggtggcactggacacggaaacgacggcattggac
ccactgaatgctgatttggtgggtatttcctgtgcctggcaggaaggcgatcagattgaa
gcagtgtatattccggtaggacatcgggatgacagtacacagttggtgctggatcatgtt
ttagccacgttgcgcccctggctggaaaatccgcaggccgccaagctggcgcaaaatgcc
aagtatgactggcgggtgttctggcgttacgacattcatccggcaggcttgtgccgggat
accctgctggaaagttacatcctggacagcagccagaataaccacgatctggatactctg
gcgcagcgccatctgcagcaccagaacattacctacgaagaagtcgcgggcaaaggcaaa
gcggcacgcaattttgccgacgtgcccgtatctgaggccttaccctatgcggctgaagat
gcggacgtttgttggcggattgatgcccaactgtggccacgttttgccaatgaggcgggc
ctgcagcgcgtcctgatggacattgaaatgccgctggtgctggtgctggcgcgtatggaa
caggccggtgttcgggtagataaggagcagttgaagaccctcagcatggaattgggcagg
gatatggccgcttgtgaagcccaagctttcaagtcagccggacaatcgtttaatctcggc
tcaccgaaacaaatccaggaaattctgtttgataaaatgcagttgccggtcctgaaaaaa
acgcctggtggccagccctctaccagtgaggatgtgttggcccagctggcggttcaggcg
gatctcccccgactgattctggaatatcggggaatggccaagctgaaaaacacttacgca
gatgccctgccggaaatgatcaacccccggacaggtcgggtgcatacccattttcagcag
gccgtggcggccaccggacgcttgtcttccagtgcgccgaatttgcagaatatcccggtg
cgtaccgagcagggtcggcgtatccggcaggcatttgttgccgaagacggattttatctg
ctgagtgccgattactcacaaattgaattgcgcatcatggcccacctttcccgggacgcc
cgtcttttgcaggcttttgccgagggccaggatattcatgccgcgacggcggccgaagtg
ttcaatttggctccggaggcggtagatagtgatgcccggcgtgcagccaaagccatcaat
ttcggcttgatatatggccagaccccctatggcctcgcccagcagttaggtattgagcag
agcgctgcccgggcttacatggatcggtacttcgaacggtatccaggggtgctcacttac
atggagcaaacccgtgttctggcgcgccagcagggctatgtggaaaccctgttcggacgc
cgtctgtatgtgcctgaaattcgctccagtaatgcggcgcggcgcaattacgccgagcgg
gctgccatcaacgcgcccatgcagggtacggcggctgatctgatcaaaaaagccatgatt
gctgtagatgcctggttgcaggaaaccccggcccggggtcgaatgattttgcaggtacat
gatgagttgatacttgaggtgcccgagagtggtcttgaagctgcccgtgccgccctcaag
gagcttatggaaggcgtggcggatctggcagttcccctactggtgggtctcggggtggga
aagcattgggatgctgcgcacggctaa

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