Acidithiobacillus thiooxidans: GCD22_00250
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Entry
GCD22_00250 CDS
T06281
Symbol
xthA
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
atx
Acidithiobacillus thiooxidans
Pathway
atx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
atx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GCD22_00250 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atx03400
]
GCD22_00250 (xthA)
Enzymes [BR:
atx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
GCD22_00250 (xthA)
DNA repair and recombination proteins [BR:
atx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
GCD22_00250 (xthA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
QFX94786
UniProt:
A0A5P9XNR7
LinkDB
All DBs
Position
232118..232894
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AA seq
258 aa
AA seq
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MSMKVASWNVNSLKVRLPQVLEWLQEKSPDVLCLQETKLSDEKFPVAELAEAGYHALYHG
QPTYNGVAILSRSVPEDGRCDWPDGSDGQARLCAGTFAGTRVVNVYVPNGQSLESDKYPY
KLQWLERLRALIAKELQQWPRLLLVGDFNIAPDDRDVYDPVAWGEEVLCSPPERAALTAL
LNLGLQDSWRHQHGDLQEWSWWDYRAAGFRRNRGLRIDLILASNALMTKVQDVVIDRNAR
AAERPSDHAPVLIQLEEV
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgaaagtggccagttggaatgtcaattcactgaaggtgcggcttccgcaagtg
ctggagtggttgcaggaaaaatctccggatgtgctgtgtctgcaggaaaccaagctcagc
gatgaaaaatttcccgttgccgaactggctgaagcgggttatcacgcactatatcatggg
cagcctacctataacggcgtggcgatactcagtcgcagcgtgccggaagatgggcgctgt
gattggcctgatggaagcgacggtcaggcgcggctttgcgccggcactttcgcgggtacc
cgggtggtgaatgtgtatgtgcccaacggtcagtcattggaaagtgacaaatatccctac
aagctgcagtggctggagcgtttgcgcgcgttgattgcaaaggaattgcagcagtggccc
cggctgctgctcgttggagattttaatattgcccccgatgaccgggatgtttatgacccg
gtggcctggggtgaagaggtcctgtgctcaccccccgaacgggcagccctgacggccctg
ctgaatctcgggttgcaggatagctggcgtcaccagcatggtgatcttcaggaatggagt
tggtgggattatcgggcggcaggattccgccgcaatcgcgggttgcggattgatttgatt
ctggcctccaatgccctgatgacgaaggttcaggatgtagtcatcgatcggaatgcacgg
gctgctgaacgaccttcagatcacgcacccgttttgattcaacttgaggaggtgtga
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