Acidithiobacillus thiooxidans: GCD22_00456
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Entry
GCD22_00456 CDS
T06281
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
atx
Acidithiobacillus thiooxidans
Brite
KEGG Orthology (KO) [BR:
atx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
atx03016
]
GCD22_00456 (truD)
Enzymes [BR:
atx01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
GCD22_00456 (truD)
Transfer RNA biogenesis [BR:
atx03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GCD22_00456 (truD)
Prokaryotic type
GCD22_00456 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QFX94976
UniProt:
A0A5P9XPB2
LinkDB
All DBs
Position
412105..413193
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AA seq
362 aa
AA seq
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MSELFPRIYPHVDVLLEAELKSTEEDFQVTEMLPFTPSGTGSHYWFFIEKRGLNTQEVAK
RLAQLAGIPVRDVGYAGMKDRHAITRQSFSVPVQAGTTPDWLSLESENLHFLEMTRHDRK
LRRGVLKGNHFRLVLRHCQGEPALWETRLQHLQKTGFPNYFGAQRFGHRNLQEVSRLLSG
TARKMDRHQRGLLLSAARSALFNQVLAERVRQNNWNVLLAGEIVQLNGSHSIFLAQANEQ
ENLQQRSAEWDVHPSGPLPGRGGLSPENQAALVEKQALDALPEESETLGNIRHWPQQLAA
QDVDAARRALRARPDSLQYHWQDASTLILEFSLPAGVFATSCIEALLGHEQVRADRLDLC
VD
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaattattcccacgcatttatccgcatgtggatgtcctgctggaagccgaactc
aaatcgacggaagaggattttcaggttacggaaatgctgccttttacgccttccggtacg
gggtcgcattactggtttttcattgaaaagcgcggactgaatacccaggaagtagccaaa
cgactggcacaacttgccggcatccccgtgcgtgatgtgggttatgcgggaatgaaagat
cggcacgccattacccgacagagtttttccgtgccggtacaagccgggacaacgccggat
tggctgagcctggaaagtgaaaatctccattttctggagatgacccgccatgaccgcaag
ctccgcaggggggtgctcaagggaaatcattttcgcctggttttgcgccattgtcagggc
gaaccagctttgtgggagacgcgtttgcagcatttgcaaaaaacgggctttcccaattat
tttggagcgcaacgctttggccaccgtaatttgcaggaggtcagtcgcctgttgtccggt
acagcgcgcaaaatggatcgtcatcaacgtggcctgctgctgtcagcggcgcgctctgca
ctttttaatcaggtgctggccgaacgggtacgccaaaataattggaatgttctcttggcg
ggagaaattgtgcaattaaatggttcgcatagcatttttctggcccaggctaatgagcag
gagaacttgcagcagcgttctgcagagtgggatgtgcaccccagtggacccctgccgggc
cggggagggctctctcctgaaaatcaggctgccctcgtagaaaagcaggccctggatgcc
ttgcccgaggagtcagagactttgggtaatatccgtcattggccacaacaattagccgcg
caggacgtggacgctgcccgccgcgccctgcgtgcgcgtccggattcgctgcaataccac
tggcaggatgccagcaccctgattctggagttttcgctacctgcgggcgtatttgcaacc
agttgtattgaagcattactgggccatgagcaagttcgcgccgataggcttgacctttgt
gttgactag
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