Acidithiobacillus thiooxidans: GCD22_00605
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Entry
GCD22_00605 CDS
T06281
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
atx
Acidithiobacillus thiooxidans
Pathway
atx03420
Nucleotide excision repair
atx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
atx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GCD22_00605
03430 Mismatch repair
GCD22_00605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atx03400
]
GCD22_00605
Enzymes [BR:
atx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GCD22_00605
DNA repair and recombination proteins [BR:
atx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GCD22_00605
MMR (mismatch excision repair)
Other MMR factors
GCD22_00605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QFX95104
UniProt:
A0A5P9XN83
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All DBs
Position
complement(551077..553002)
Genome browser
AA seq
641 aa
AA seq
DB search
MSDPDAIDNSTMDAGVEEEIHACLDLAQPRSFFLYAGAGSGKTRSLVNALKEVQTSSRKQ
LVLAGRGVAVITYTNNACEEIKQRLDFDPLVEVSTIHSLAWSLIGGYHADIRKWLRENIK
QKLIELEAAAAKGRLGTKAAEDRQRSIAIGKKRLGRLDSIKRFVYSPTGDNRTRDSLNHS
EVIGIAADFLKGKPLLQNILVSKYPIIFIDESQDTNKNLMDAFLAIQQAQKDRFCLGLFG
DTMQRIYADGKVGLEKAIPADWATPVKKLNYRCPHRIIQLINRVRSAADGQMQQGPKDSV
QGFVRFFILPNNMADVADVEEQFATKMAEVTGDSGWLKGEFKTLILEHHMAARRLGFDAM
FTPLYAIERLRTSLLDGSLSSLRLFSEEVLPVVEAFRSDNAFRVAEITRKHSPLLRPEAL
SAAGSNQLIQIQKTKAAVVELAKLWNNDAHPSFQLVLDTLAATKLFVIPDALAIFLSQAD
MDETGDQRAEDKAVDDKEEDETSKIDIELEGWREFLATPFDQIKAYADYVAGKSPFGTHQ
GVKGLEFQRVKVVVSDEEARGFTFSYEKLFGAKAKSASDIRNEESGDETTIDRTRRLFYV
TCSRAMESLAIVAYSEKPDAVRNSVVGEGWFTAEEVEVLTD
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatccagacgcaatagataacagtacaatggatgcgggtgtcgaggaagagata
cacgcgtgccttgatcttgcacaaccccgtagcttcttcctctatgctggagcggggtct
ggcaaaactagatcgctcgtaaatgccctcaaagaagttcaaactagctcacgaaaacaa
ctagttcttgctgggcgcggcgtagcagtcatcacctataccaacaacgcttgcgaggag
atcaagcagcgcctcgactttgatccgctagttgaagtctccacaatccattccttggca
tggtcgttaatcggtggttatcacgcggatatccgtaagtggcttcgagagaacatcaag
caaaaactaattgaactggaagcagctgcggcaaagggcaggctgggaaccaaggctgca
gaggatcgtcaacgctcaatcgcaatcggtaaaaaacgcctcggccgcctcgattcaatc
aaacgctttgtttacagccctacaggtgataaccgcactcgggactctctcaatcacagc
gaagtcatcggtatagctgccgatttcctaaaaggaaagccacttctccagaacattctg
gtaagcaagtatccaatcatcttcatcgacgaaagccaggatactaacaagaacctgatg
gatgcattcctggcgatccagcaagctcaaaaggatcgcttctgtttgggactcttcggg
gataccatgcagcgcatttatgcggatggaaaagtaggactagagaaagccattccagcc
gactgggcaactccggtcaagaagttgaattatcgctgcccccatcgcatcattcagctc
attaatcgagtccgctcagctgctgatggacaaatgcagcagggacccaaagacagtgta
cagggttttgtgaggtttttcattctccccaacaacatggcggacgtggctgatgtagaa
gagcagttcgccactaagatggcggaggtaactggagactctggctggttgaagggtgaa
tttaagacgctcattctcgaacatcatatggccgctcgccgtttgggattcgatgcgatg
ttcacacccctctatgcaattgaacggctcaggacatcgctgctggacggttcgctctcc
agccttcgccttttctctgaagaagtcttacccgtagttgaggcatttagaagtgacaac
gcctttcgtgttgcagagatcacccgaaaacattccccactcctgcgtccggaagcgctt
tctgcggccggatcaaaccaactgatccagattcaaaagacaaaagcggccgtggtagaa
cttgcaaagctgtggaacaacgatgctcatccatccttccagctggtgctagacacactc
gcagcgacgaagttgtttgtcattcctgacgcactcgcgatctttctttcgcaagcggat
atggatgaaaccggagatcagcgggcagaggacaaggcagtcgatgataaggaagaggac
gagacaagtaagattgacatcgagttggaggggtggcgggaatttcttgccacacccttt
gatcagatcaaggcatacgcagactacgtcgcagggaaatcccccttcggtacgcaccaa
ggcgtgaagggtctcgaatttcagagggttaaagtcgtagtcagcgacgaggaagcgcgt
ggtttcacattcagctatgaaaaattattcggtgcaaaagccaaaagtgcctcagacatt
agaaacgaagagtcaggtgacgagaccacgattgatcgtacgcgccgcctcttttatgtg
acatgcagtcgagctatggaaagccttgcgattgtggcctattccgaaaaaccggacgca
gttcgaaatagtgtcgtaggtgagggatggttcactgccgaagaggttgaggttctcaca
gactaa
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