Acidithiobacillus thiooxidans: GCD22_01245
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Entry
GCD22_01245 CDS
T06281
Symbol
fliA
Name
(GenBank) RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
atx
Acidithiobacillus thiooxidans
Pathway
atx02020
Two-component system
atx02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
atx00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GCD22_01245 (fliA)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
GCD22_01245 (fliA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atx03021
]
GCD22_01245 (fliA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
atx02035
]
GCD22_01245 (fliA)
Transcription machinery [BR:
atx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GCD22_01245 (fliA)
Bacterial motility proteins [BR:
atx02035
]
Flagellar system
Flagellar assembly proteins
Stator
GCD22_01245 (fliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
MscS_porin
UPF0122
Motif
Other DBs
NCBI-ProteinID:
QFX95636
UniProt:
A0A5P9XR54
LinkDB
All DBs
Position
1152883..1153572
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AA seq
229 aa
AA seq
DB search
MSAEVARFTPLVQRIAQRVWARLPANIELADLVQAGLIGLMDALSSQENSTGEAFVAYAS
LRIRGSIMDELRNQDWLPRRARAKEQSIRKAITRLEQQLGRAPEEEEIAAALGWNLKTYQ
SALQDTGGQIVYLEDLSADQDVFAGRYLRDKTPDMTTILGSAEFSRDLQGSIKCLPEREQ
QVLALYYQEELTLKEIGIVLEVTESRVSQIMRQAILRLRSNLGDWNDAP
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcagaggtggcgcgtttcacgccactggtgcagcgcattgcccagcgggtgtgg
gcccgattgccggccaatattgaattggcggatctggttcaggcgggattgattggtttg
atggatgcgctttccagtcaggaaaatagtacaggtgaagcttttgtagcttatgcgagc
ttgcgtattcgtggcagtatcatggatgagctgcgtaatcaggattggcttccccggcgt
gcgcgggccaaggagcaatctatacgcaaagccattacgcgccttgaacagcaactgggg
cgcgcgcctgaagaagaagaaattgccgctgcgttggggtggaatctcaaaacctatcaa
tcggctttgcaggatacgggtggacaaattgtttatctggaagatttaagcgcggatcag
gatgtttttgcgggacgttatttgcgcgacaaaacccctgacatgaccaccatattgggt
tctgcggaattttctcgagatcttcaaggtagcataaaatgcctccccgagcgggagcag
caggtattagccctgtactatcaggaagagttgaccctgaaagaaatcggcatcgtgctt
gaagtcacggagtcccgggttagccagattatgcgtcaggcgattttgcgtttgcgcagt
aatcttggtgattggaatgatgctccgtaa
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