Acidithiobacillus thiooxidans: GCD22_02000
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Entry
GCD22_02000 CDS
T06281
Symbol
cmpR
Name
(GenBank) LysR family transcriptional regulator
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
atx
Acidithiobacillus thiooxidans
Brite
KEGG Orthology (KO) [BR:
atx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
atx03000
]
GCD22_02000 (cmpR)
Transcription factors [BR:
atx03000
]
Prokaryotic type
Helix-turn-helix
LysR family
GCD22_02000 (cmpR)
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like_2
SBP_bac_11
PBP_like
Motif
Other DBs
NCBI-ProteinID:
QFX96259
UniProt:
A0A5P9XRK1
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Position
1774854..1775852
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AA seq
332 aa
AA seq
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MNNKQNQEEKSRSFHSLLRHVTFRQLQIFSTVIRMKSFTKAADELFLAQPTISLQMKKLG
EAIGLPLFESSGKEIRPTDAGQDLYAACRELFRTFENLETQLADRKGIRRGKLRLGVVTT
AKYIAPELLAAFGQQFPGIEFAMTVSNRDEIIQRIQNGEDDLYVMGQVPDNEVDVEAIPF
ALNPLTVMVPRGHPLTRQKKPVPLHAVAETPFLIREPGSGTRHAYLRLFEEQGLRPRITM
ELSSNEAIKHAVASSLGISILSIHSLALEGTSGPIEVLETEQFPILRKWFLVYPRNRQLS
LTAGKFLDFSVSQEPFITNRLVQLWPELARYL
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgaataacaagcaaaatcaagaagaaaaatcgcgatcctttcattcgcttttgcgccat
gtgacttttcggcaattgcagattttttctacggttattcgcatgaaaagttttaccaag
gcagcggatgagctctttctggcacagccaaccatctccttgcaaatgaaaaaactagga
gaagcgatagggcttcctttatttgaatcaagcggaaaagaaattcgacccactgatgcc
ggtcaggatctgtatgcagcctgccgggagctatttcgtacttttgaaaacctggaaaca
caacttgctgatcgcaagggaatacgtcggggaaaattacgcttgggcgtggtgactact
gccaaatatattgctccggagctactggcggctttcggtcagcaatttcccggcatcgag
tttgccatgacagtcagcaatcgcgatgaaatcattcaacgcatccagaatggggaagat
gatctctatgtcatgggacaggtacccgacaacgaggttgatgtagaggctattcctttt
gcattgaatcccctgacggtcatggtaccgcgaggacaccctcttacccgtcaaaaaaaa
cctgtcccactgcacgctgttgcagaaactccctttctcatccgggaaccgggatcagga
acgcggcatgcttacttgcgcctatttgaggaacaaggcttgcggccccggatcactatg
gagctcagcagcaatgaagcgatcaagcatgctgtagcaagcagtctgggaatatccatt
ctctccattcattcactggcactggaaggaaccagtggccccattgaggtcctcgagacg
gaacagtttccaatcttgcgtaaatggtttttggtctatccccgaaaccggcaactctcc
ctaacagcaggaaaatttttggacttctctgtttctcaggaacccttcattactaatcgc
ctcgtgcagttatggcctgaactggctcgatatctctaa
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