Acidithiobacillus thiooxidans: GCD22_02215
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Entry
GCD22_02215 CDS
T06281
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
atx
Acidithiobacillus thiooxidans
Pathway
atx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
atx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GCD22_02215 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atx03019
]
GCD22_02215 (recQ)
03400 DNA repair and recombination proteins [BR:
atx03400
]
GCD22_02215 (recQ)
Enzymes [BR:
atx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GCD22_02215 (recQ)
Messenger RNA biogenesis [BR:
atx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GCD22_02215 (recQ)
DNA repair and recombination proteins [BR:
atx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GCD22_02215 (recQ)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
RecQ_Zn_bind
Helicase_C
HRDC
ResIII
Motif
Other DBs
NCBI-ProteinID:
QFX96442
UniProt:
A0A5P9XRF6
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All DBs
Position
1962916..1964724
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AA seq
602 aa
AA seq
DB search
MPTITPSLEILRHTFGYEQFRAPQEEVIATLMSGQDALVLMPTGGGKSLCYQIPAISRPG
AGVVISPLIALMEDQVNALRQAGVAAAALNSSIQPREIRETEEALRSGQLDLLYIAPERL
LQDRTLRLLQQCQVNLFAIDEAHCVSQWGHDFRPEYLQLKVLHERFPAIPRIALTATADP
KTRLEIIERLGLQRARIFTRSFDRPNIRYHIHSSSQGARNALLRFIRDHHDGEAGIVYCL
SRKRVEEIATWLQAEGLDALPYHAGLSADERRRHQQRFQRDEGVIIVATIAFGMGIDKPN
VRFVAHLNLPKSIEAYYQETGRAGRDGLPAEAWMHYGLQDVVQLRQMIQQSEADQQRKQM
EGQKLDAMLALCETTQCRRQTLLSYFGETLAQPCGNCDNCLTPPATWDATVAAQKALSAV
HRTGQRFGVQYLVDVLLARDDPRIQQWGHHQLRVYGIGKELSANAWRALFRHLLLRGLVE
VDSEGHGGLRLSPLSRPILRGEQTLTLRQHDNAQPRKKEKVQEIPASDKALWEDLRQHRR
ALAQTQGVPPYVIFHDATLMEMLRLRPLSLASLATVPGVGERKLAAYGESFLAILLNHAG
RS
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgcccaccattacgccctctctcgaaatcctgcgccacacattcggctatgaacagttt
cgagcccctcaagaggaagtcatcgccacactcatgagcggccaggacgcactggtgttg
atgcctaccgggggcggcaagtcattgtgttatcagattcctgcgatctcccgtcctggt
gctggtgtagtcatatcaccactcatcgcgctgatggaagatcaggtgaatgccttgcgg
caggcgggggttgcagcggcggctctcaattccagcattcagccccgggaaatccgcgaa
accgaagaagccctgcgcagcggccaactggatttactgtacattgcccccgagcgtctg
ctgcaggatcgtaccctgcgcctgctgcaacaatgtcaggtcaatcttttcgcgattgat
gaggcccattgcgtatcccagtggggacatgattttcgcccggaatatttgcaactgaag
gttcttcacgaacgcttcccggccataccgcgcattgccctgaccgccaccgcagacccc
aaaacccgtctggaaatcatcgaacgactgggactgcaacgcgcacgcatttttacccgg
tcttttgatcgtcccaatatccgctaccacatccacagcagcagccagggtgcgcgcaac
gccctgctgcgttttattcgcgaccaccatgatggtgaagcaggcattgtttactgcctt
tcccgtaaacgcgtcgaagaaatagctacatggcttcaggctgaaggattggacgccctg
ccctatcacgccggcctttctgcagatgaacggcgtcgccatcaacagcgttttcaacgc
gatgagggtgtcattattgtagcaactattgcttttggtatgggtatcgacaagcccaat
gtgcgttttgtggcccatctcaatttgcccaaaagtatcgaagcctattatcaggaaacc
ggtcgggcggggcgtgacggtttgccggctgaagcctggatgcattatggcctgcaggat
gtggtgcaactgcggcagatgatccagcaatctgaagccgaccagcaacgcaagcaaatg
gaaggccaaaaactggatgccatgctcgctctttgtgaaacgacgcaatgccggcgccag
accctgctcagctattttggcgaaaccctcgcccagccctgcggaaattgtgacaactgc
ctgacccctccggccacctgggatgccaccgtcgctgcacaaaaagccctctctgcggta
caccgcacgggtcagcgttttggagttcagtatctggtcgatgtcttgcttgcccgcgat
gatccccgtattcagcaatggggccatcatcaactccgggtctatggcattggcaaggaa
ttatctgccaacgcctggcgcgccttgttccgccatctgttactccggggcctggttgaa
gtagatagcgaaggacatggtggcttgcgtctgagtccgctgagtcgtcccattttgcgc
ggcgaacaaactctcaccctgcgccagcacgacaacgcccagccccgaaaaaaagagaag
gtccaggaaattcctgccagcgacaaagcactatgggaagatttacgtcagcatcgccgc
gccctggcacaaacccagggagtacctccctacgtgatctttcatgatgcgacgctgatg
gaaatgctgcgcctgcgccccctgagcctggccagtctcgccacggtgcccggcgttggt
gaacgcaaactcgccgcttatggggaatcgtttctggccatattactgaatcacgcaggc
cggtcctaa
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