KEGG   Acidithiobacillus thiooxidans: GCD22_02225
Entry
GCD22_02225       CDS       T06281                                 
Symbol
holC
Name
(GenBank) DNA polymerase III subunit chi
  KO
K02339  DNA polymerase III subunit chi [EC:2.7.7.7]
Organism
atx  Acidithiobacillus thiooxidans
Pathway
atx03030  DNA replication
atx03430  Mismatch repair
atx03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:atx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    GCD22_02225 (holC)
   03430 Mismatch repair
    GCD22_02225 (holC)
   03440 Homologous recombination
    GCD22_02225 (holC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:atx03032]
    GCD22_02225 (holC)
   03400 DNA repair and recombination proteins [BR:atx03400]
    GCD22_02225 (holC)
Enzymes [BR:atx01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     GCD22_02225 (holC)
DNA replication proteins [BR:atx03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     GCD22_02225 (holC)
DNA repair and recombination proteins [BR:atx03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     GCD22_02225 (holC)
SSDB
Motif
Pfam: DNA_pol3_chi XPG_I_2
Other DBs
NCBI-ProteinID: QFX96451
UniProt: A0A5P9XR08
LinkDB
Position
1974786..1975211
AA seq 141 aa
MPAASFYDLPATLLTPQEQLRAICRVINKVWQVVGEADILCADLATAQSVDDMLWTFQAD
AFIPHGLGAKYSVRIHYQQPWPDACVVAVLCALQNLPEPLPACERLVDFIPAESNARDLA
RERYKTLKNIGYTLQVHTLEA
NT seq 426 nt   +upstreamnt  +downstreamnt
ttgccggctgcttccttctatgacctgccagccaccctgttgaccccgcaggaacaatta
cgcgccatttgtcgggtcatcaacaaggtctggcaagttgttggggaagcagatattctc
tgcgcagatttggcaaccgctcagagcgtggacgacatgctctggacttttcaagcggat
gcttttattcctcatggactgggggcaaagtattctgtacgcatacactaccaacaacca
tggccggatgcctgcgtggttgccgtgttgtgtgccttgcagaatcttcctgagccactt
ccggcgtgtgaaagactggtagattttattccagccgagagcaacgctcgcgacctggca
agagagagatataaaacattgaagaacatcggatacactttgcaggtacataccctggaa
gcctaa

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