Acidithiobacillus thiooxidans: GCD22_03033
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Entry
GCD22_03033 CDS
T06281
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
atx
Acidithiobacillus thiooxidans
Pathway
atx03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
atx00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
GCD22_03033 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atx03019
]
GCD22_03033 (orn)
03009 Ribosome biogenesis [BR:
atx03009
]
GCD22_03033 (orn)
Messenger RNA biogenesis [BR:
atx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GCD22_03033 (orn)
Ribosome biogenesis [BR:
atx03009
]
Eukaryotic type
Pre-60S particles
RNases
GCD22_03033 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
HAAS
Mre11_acc_DNA_cap
bAvd
Motif
Other DBs
NCBI-ProteinID:
QFX97155
UniProt:
A0A5P9XSV8
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All DBs
Position
2713520..2714083
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AA seq
187 aa
AA seq
DB search
MDPKNQRLVWVDLEMTGLHPEQDEILEIASIVTDNQLRIICEGPVLAVHHPDTVLAKMDD
WNQRTHGQSGLIQRVRESRLDTQAVETQTLDFLSAHVAAGTSPICGNSVCQDRRFLARLM
PRLERFFHYRMIDVSTLKELTSRWYPGFPRFPKAEKHEALADIRESIDELAYYREKIFPQ
LLESPEK
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atggaccccaaaaaccaacgcttagtctgggtggatcttgaaatgaccggtctgcaccct
gagcaggatgaaattcttgaaatcgccagcattgtcaccgacaaccagcttcgcattatc
tgcgaagggccggtgctggccgtgcatcatcccgacactgtgctggccaaaatggatgac
tggaatcagcgtacccatggtcaatccgggctgattcagcgggtgcgagaaagtcgcctg
gatacccaggccgtggaaacccagaccctggattttctcagcgcgcatgttgctgccgga
acttcgcccatttgcggcaatagtgtttgccaggatcggcgttttctggcacgactgatg
ccccgactggagcgcttttttcactatcggatgattgatgtcagcacgcttaaagagctg
acttcccgctggtatcccggcttcccgagatttcccaaagcagaaaaacatgaggccctg
gcggatatccgtgaatccattgacgaactggcttactatcgggagaagatctttccgcag
cttctggagtctcctgaaaagtag
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