Acidithiobacillus thiooxidans: GCD22_03264
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Entry
GCD22_03264 CDS
T06281
Symbol
recJ
Name
(GenBank) single-stranded DNA exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
atx
Acidithiobacillus thiooxidans
Pathway
atx03410
Base excision repair
atx03430
Mismatch repair
atx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
atx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GCD22_03264 (recJ)
03430 Mismatch repair
GCD22_03264 (recJ)
03440 Homologous recombination
GCD22_03264 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atx03400
]
GCD22_03264 (recJ)
DNA repair and recombination proteins [BR:
atx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
GCD22_03264 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
GCD22_03264 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
GCD22_03264 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
QFX97354
UniProt:
A0A5P9XUY2
LinkDB
All DBs
Position
complement(2907540..2909339)
Genome browser
AA seq
599 aa
AA seq
DB search
MPEPIKIIDRPLSQDVFNAAVAAGYTPLQSRIIAGRLGDEDAGRVGLLVRPPLSALDPPD
RLPDINVAAEAVARAVKQGLPLILLSDFDCDGASGHAVLKFALRDYFGVPEHRIHSYIGH
RLREGYGVSESVTQRILDSAPRPALVITADQGSSDHDRIKKLRDHGLTTIVTDHHGVPEQ
GPPHAAIACVNPVRTDSSFADPYIAGVHVAWLLCCAVRQKLIDWGHLPANAPRLGGLLDL
VALGTMADCVDLARSANNRAVLTRGLALMNVPEARPVWRALYKVSRCSGPITAATLSFTF
GPIINARGRLDCALGAVDLLMCDDEAEAIRLAHVLVEHNSERKRVQSKMLRRILPLAEEQ
AVDGAMAITVFDPEGHPGVHGVCAARLVEAYGRPAAYFSPKQESEHITASLRTVPGFHIR
NALAGIAESYPDDFVAWGGHAGAGGVTLKREGFDRFATAFNAAATRALAAWTPGPRILSD
GALEQLPSLELLKEFALLEPFGRQWEAPVFCTEGQILSVRPVGDGTHLKLLLGIGPNRFD
AIWFGAVRDGVCPVETGQLVRVTFELEANTFRDETSLQLRVRHAVVIAGKPVMVQRVAT
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgccagaacccataaaaatcatcgacaggccattgtcacaagatgtttttaatgcggca
gtagcggctggttatacgccactccaatcgcgtatcatcgccggtcgattgggtgatgag
gatgcgggaagggtgggattgcttgtgcgcccgccgctgagtgcgctcgatccaccagac
cgtttacccgacatcaacgtcgccgctgaggctgtagcaagggctgtgaaacaagggttg
ccgttgattctgctgtcggacttcgactgtgatggagcgtccgggcacgcggtgctgaag
tttgcgttgcgtgactacttcggtgtgcccgaacaccggatacacagctacatcggccat
cgcctgcgggaagggtatggcgtatcggaaagcgtcacccagcggattctggactcggca
ccgcgtcctgcacttgtcattactgcggaccagggcagttcggaccatgatcgcatcaag
aagctccgcgatcatggtctgacgacaatagtgacggaccaccatggggttccagagcaa
ggcccgccgcacgccgccatcgcctgtgtcaatcccgtccgcacggattcaagctttgcc
gacccctacatcgcgggcgtgcatgtggcctggctactctgctgtgctgtacggcaaaag
ctcatcgactgggggcaccttccggccaatgcgccccgtctgggcggtctcctcgacctg
gttgcgctgggaaccatggcggattgtgttgatctggcccgctcggcgaataatcgtgcg
gttctgacacgcggcctcgcattgatgaacgtaccggaggcgcgacctgtgtggcgtgcc
ctgtacaaggtctctcgttgcagcggcccgattacagcggcgacattgagttttaccttc
gggccgatcatcaatgcccggggcaggctggattgcgcactgggggccgtcgacctgttg
atgtgcgacgacgaggcggaagccatacgcctggcgcatgttttggtggagcacaatagc
gagcgcaagcgggtccaatccaagatgctgcgccgtatcctgccattggcggaggagcag
gcggtggacggggctatggccattaccgtgttcgatccggaagggcatccgggcgtacat
ggggtctgcgctgcccgtctggtggaagcctatggacggcctgctgcctatttctcgccc
aagcaggaaagcgagcatatcaccgcttcgctgcgcaccgtgcctggatttcatatacgc
aacgcgctggcagggattgcagaatcctatccggacgacttcgttgcctggggcggtcat
gccggtgctggcggcgtcaccttgaaacgtgaggggtttgatcgtttcgcgacagccttc
aatgcagctgcaacccgtgccctggcagcgtggaccccgggcccccggatactgagtgat
ggggcgctcgaacagctcccaagtttggaactgctcaaagagttcgcgctgttggagcct
ttcggtcggcaatgggaggcgcccgtcttctgtacggaaggtcagattctcagtgtgcgt
cccgtcggggatggcacccacctcaaattgttgctgggcatcgggccaaatcgattcgat
gccatctggtttggggcggttcgtgatggagtgtgtcccgtggaaacggggcagcttgtc
cgggtaactttcgagctggaggccaataccttcagagacgagacgtccttgcaattgcgc
gtccgccatgcggtggttattgcagggaaaccggtgatggttcagcgagtcgctacatga
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