Acidithiobacillus thiooxidans: GCD22_03369
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Entry
GCD22_03369 CDS
T06281
Symbol
mutM
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
atx
Acidithiobacillus thiooxidans
Pathway
atx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
atx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GCD22_03369 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atx03400
]
GCD22_03369 (mutM)
Enzymes [BR:
atx01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
GCD22_03369 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GCD22_03369 (mutM)
DNA repair and recombination proteins [BR:
atx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GCD22_03369 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
SHS2_Rpb7-N
Motif
Other DBs
NCBI-ProteinID:
QFX97444
UniProt:
A0A5P9XV75
LinkDB
All DBs
Position
complement(3001449..3002261)
Genome browser
AA seq
270 aa
AA seq
DB search
MPELPEVEVTRLGISPHLLGKNLQGAIVRESRLRLAVNADLSAQVAGQKLEQIRRRGKYL
LLDLQRGSILIHLGMSGHLRVLPQDTPVEKHDHVDLLFAQDTCLRFHDPRRFGVLCWLKE
ADTHPLIARLGPEPLGEDFSGAYLHAQSRQRQIPVKAFLMDAHQVVGVGNIYANEALFAA
GIDPRRPAGRISLARYTLLAAAVRVVLEAAIQQGGTTLRDFTRPDGRNGYFRLSLAVYGR
EGQACIRCGKALQGIRIGGRATTYCSHCQH
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagttaccggaagtggaagtgacccgtctgggaatcagtccgcatcttttggga
aaaaatctgcagggcgcgatcgtgcgtgaatcacgtttgcgcctggctgtgaatgcggac
ttgagcgcgcaggttgccggtcagaaactggagcaaataagacggcgcggcaaatatctg
ctgctggatttgcaacggggcagcattctgattcatttggggatgagtggacacttgcgg
gtactcccgcaggacactccggtggagaagcatgatcatgtggacctgctttttgctcag
gatacgtgtttgcgtttccatgatccccgccgttttggcgtactttgctggctgaaagaa
gcggatacgcacccattgattgcccgccttggtcccgaacctctgggcgaggatttttcc
ggagcctatctccatgctcagagtcgtcagcgccagattccggtaaaagcctttctgatg
gatgcgcatcaagtggtgggtgtgggaaatatttacgccaatgaggccctttttgccgca
ggcattgatccgcgtcgcccggccggacgcatctctctggctcgctacaccctcctggcc
gcagccgtgcgtgtcgtgctggaagctgctattcagcagggggggacgactctgcgcgac
tttacccgaccagatggcagaaatggatattttcgactatctctggcggtatacggacga
gaaggacaagcctgtatccgctgtggaaaagctttgcagggaatacgcatcggcgggcgg
gcgaccacttattgttcccattgtcagcactga
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