Acidithiobacillus thiooxidans: GCD22_03696
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Entry
GCD22_03696 CDS
T06281
Symbol
hup1
Name
(GenBank) DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
atx
Acidithiobacillus thiooxidans
Brite
KEGG Orthology (KO) [BR:
atx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
atx03032
]
GCD22_03696 (hup1)
03036 Chromosome and associated proteins [BR:
atx03036
]
GCD22_03696 (hup1)
03400 DNA repair and recombination proteins [BR:
atx03400
]
GCD22_03696 (hup1)
DNA replication proteins [BR:
atx03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
GCD22_03696 (hup1)
Chromosome and associated proteins [BR:
atx03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
GCD22_03696 (hup1)
DNA repair and recombination proteins [BR:
atx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
GCD22_03696 (hup1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
Urease_beta
DUF294_C
HU-HIG
Motif
Other DBs
NCBI-ProteinID:
QFX97720
UniProt:
A0A5P9XVV8
LinkDB
All DBs
Position
3307496..3307771
Genome browser
AA seq
91 aa
AA seq
DB search
MNKSEFISALARHGEMSKTDAEKFFQAFRHTLEAELPSAGKIVFRGFCTFEVVEKPARKG
RNPATGQEIDIPAKKSVKFKAGKEFADKVNS
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaatccgaatttatatccgcactggcacgtcacggtgaaatgtccaaaacagat
gccgagaagttttttcaggcttttcggcatacgctggaagcggaattgccgtcagccgga
aagattgtctttcggggtttctgtacctttgaggtcgtggaaaaacccgcccgtaaaggt
cgcaatccggcgactggacaggaaatcgatattcccgccaaaaagagtgtaaagtttaag
gcaggtaaagaatttgcagacaaagtgaacagttag
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