Acidiferrobacter thiooxydans: A9R16_001235
Help
Entry
A9R16_001235 CDS
T07877
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
aty
Acidiferrobacter thiooxydans
Pathway
aty00550
Peptidoglycan biosynthesis
aty01100
Metabolic pathways
aty01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
aty00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
A9R16_001235 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
A9R16_001235 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
aty01011
]
A9R16_001235 (mrdA)
Enzymes [BR:
aty01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
A9R16_001235 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
aty01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
A9R16_001235 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
UEO00056
LinkDB
All DBs
Position
complement(240263..242143)
Genome browser
AA seq
626 aa
AA seq
DB search
MRIIPLKNDSQELRLFESRIWVAAVLGTLLVLGLLMRLGYLQVVKHRYYATLAQDNRVSP
VPIAPARGLILDRNGVVLADDFPVFTLQVTPDRVPNMDRLLAKLRPLVALNAQDIREFRR
RLTQHKPFQSVTLRAHLSEAEAARVAVNLTRLTGATLHAQLRRYYPLGGLATAAIGYVSR
ITQTELHGRNADRYVGYRDIGQMGVEKSYQKELMGRIGYKDVEMDARGRAVKVLKRILPH
AGHNLYLNIDAQMQAIGEQMLNNRPGTVVALNPRTGAVLTFISSPIYDPNPFVVGIREKA
YKALATNPNGPLDNRALNGLYPPGSTIKPFYAYAALQTRWFHPHKYITCPGYYHLPHSTH
LFHCWKPLGMGRVDLKDAIEQSCDVYFYRLAFKQGINRMTRYLTDFGFGHRTGIDLPGEY
RGLVPTKAWIKASGRPWYPGQTVITGIGQGPLLVTPLQLADAVAAIAHHGIRMRPEVVRG
VVNPVTHHVRFRKPYAYPAVPRRRKNSLKQLIRDMTQVVEGPHGTARGIAYGLPYKVAGK
TGTAQLWSAAPGFKGKHIRSDALFIAFAPVSHPRIAIAVVVEHAGFGALAAAPIARALMN
FYLLGHVHARPQNQLRPQIAQARISP
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcattcccctcaaaaacgactcccaggagctgcggctattcgaatcgcgcata
tgggttgccgcggttctcgggacactgctggtcctcggtctgctcatgcgcctgggctat
ctgcaggttgtcaagcaccgctactatgccaccctggcacaggacaaccgcgtaagcccg
gtaccgatcgccccggcccgcgggctcatcctggatcgcaacggcgtggtgctagccgac
gacttcccggtctttacactccaggtgacgcccgatcgcgtcccgaacatggaccggctg
ctcgctaaactgaggccactcgtggcgttgaatgcgcaggatatccgtgagtttcgcagg
cgtcttacgcaacacaagccgtttcaaagcgtcacgctgcgcgcgcacctgagcgaggcc
gaggcggcacgcgtggcggtaaacctcacccgcctgaccggcgcgaccctgcacgcccag
ctgcgccgctattatcccctcggcggtctggccaccgccgccataggatatgtaagccgc
atcacccagaccgaattgcatgggcgcaacgccgaccgctatgtcggctaccgcgacatc
ggtcagatgggggtcgagaaaagctatcagaaggaactgatggggcgcatagggtacaag
gatgtcgagatggacgcacgcgggcgggcggtcaaggtgctaaaacgcatactgccgcac
gccggccacaacctctacctgaatatagacgcccagatgcaggcgatcggcgagcagatg
ctcaataaccgaccgggcaccgtggtcgccctgaatccccgtaccggcgcggtccttacg
ttcataagcagccccatctacgatcccaacccgtttgtcgtaggcatacgcgagaaggcc
tacaaggcgcttgcgaccaaccccaatggccccctggacaaccgcgcgctgaacggcctg
tacccgccaggctctaccataaagccgttctacgcctacgccgccctgcagacccggtgg
ttccatccgcacaaatacatcacatgtcccggctattatcacctgccccatagcacgcac
ctcttccactgctggaaaccgctcggcatgggccgcgtggacctgaaagacgccatagag
cagtcctgcgacgtatacttttaccgtctggccttcaaacagggcatcaaccgcatgacc
cgctatctcaccgatttcgggttcggacaccgcaccggcatcgatctccccggcgaatat
cgggggctcgtgcctaccaaggcctggatcaaggcgagcggcagaccctggtatccagga
cagacggtgatcacgggtatcggtcagggccccttgctggtcacgcccctgcagctcgcc
gacgcagtggccgccatcgcccatcacggcatccgtatgcgtccggaggtggtacgtggg
gtcgtaaacccggtcacgcaccatgttcgcttccgcaaaccctatgcctatccggccgtg
ccccggcgccgcaagaatagcctgaagcaattgatccgagacatgacacaggtggtcgaa
ggcccgcacgggaccgcgcgcggcatcgcctacggcctcccgtacaaggtcgccggcaag
accgggaccgcccagctctggagcgcggcgcccggcttcaagggaaaacatatccgctcc
gatgcgctgttcatcgccttcgcgccggtcagccatccacgcatcgcgatcgcggtggtc
gtcgagcacgcgggctttggggcactggccgcagccccgatcgcgcgcgccctcatgaac
ttctacctcctgggccatgtccatgcgcggccgcagaatcagttgcgaccgcagatcgcg
caggcaaggatcagtccatga
DBGET
integrated database retrieval system
