Acidiferrobacter thiooxydans: A9R16_001900
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Entry
A9R16_001900 CDS
T07877
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
aty
Acidiferrobacter thiooxydans
Pathway
aty00300
Lysine biosynthesis
aty00470
D-Amino acid metabolism
aty01100
Metabolic pathways
aty01110
Biosynthesis of secondary metabolites
aty01120
Microbial metabolism in diverse environments
aty01230
Biosynthesis of amino acids
Module
aty_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
aty00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
A9R16_001900 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
A9R16_001900 (lysA)
Enzymes [BR:
aty01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
A9R16_001900 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
UEO00187
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All DBs
Position
367770..369038
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AA seq
422 aa
AA seq
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MSVLTYRDERLFMEDVALADIVSMIGSPCYVYSRRALTDAYRAFREALDVQRSLVCYAVK
ANGNLALLATLADLGAGFDIVSRGELERVLAAGGDPARVVFSGVGKTEGEMRRALELGIR
CFNVESVAELARLDTIAGTLGVRAPVSLRVNPDVDAGTHHYIATGLKENKFGIPLAEAVA
CYREGSRYPHLSFVGIDCHIGSQLTDLRPFGDALDRVLPEVAGLRRAGVALTHVDVGGGL
GVRYRDERPPTIAAYVALVRERLAAHGLQDLELILEPGRALVAAAGVLATRVEYIKETDA
KRFAIVDAGMNDLIRPALYGAWQSVTAARRRVGPAREYDVVGPVCESADVFGRGRPLVIE
SGDILVIGEAGAYGFAMSSQYNARPRPAEVLVDGARFHVVRRRETYEDLMRGECVVRAGS
RS
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgtcttgacctatcgtgacgagcgcctgttcatggaggatgtggcactcgccgac
atcgtgtctatgatcggctccccgtgttatgtctatagccgccgggccctgaccgacgcc
tatcgcgcgtttcgcgaggccttggacgtccagcgcagcctggtgtgctatgccgtgaag
gcgaacggcaatctcgcgctgctcgcgaccttggccgatctcggcgcgggcttcgatatc
gtctcccggggcgagctcgaacgggtgctggcggccggcggggatccggcgcgggtcgtg
ttttccggggttggcaagaccgagggcgagatgcgccgggccctcgagctcggaatccgc
tgtttcaatgtcgagtccgtggccgagcttgcgcgtctcgatacgatcgccggcacactc
ggggtgcgcgcgccggtgtccttgcgcgtgaatcccgacgtcgatgccggcacccaccac
tatatcgccaccggcctgaaggaaaacaagtttggcataccgttggccgaggccgtggcc
tgctaccgcgaggggtcgcgttatccccacctgtcgtttgtcggtatcgattgccatatc
ggttcgcaattgaccgatctgcggcctttcggggatgccctggaccgcgtgcttccggag
gtggcgggcctgcgccgcgcgggcgtggccctgacccatgtcgatgtcggcggggggctc
ggtgtgcgctaccgcgacgagcggccgcctacgatcgccgcctacgtggcacttgtccgc
gagcgcctggccgcccatgggcttcaggatctggaactgatcctcgagcccgggcgggcc
ttggtggccgcggcgggcgtgctcgccacgcgtgtcgaatatatcaaggagaccgacgcc
aagcgttttgcgatcgtcgatgccggcatgaatgacctgatccgcccggcgctctatggc
gcctggcaaagcgtgaccgccgcgcgccgccgcgtgggacctgcgcgcgaatacgatgtc
gtgggcccggtatgcgagagcgccgatgtcttcggccgcggccgccccctggtcatagag
tccggcgatatcctggtgatcggcgaggccggggcctatggttttgccatgagcagtcaa
tacaacgcccgcccgcggcccgccgaggtgctcgtggatggggcccgtttccacgtggtg
cgccggcgcgagacctatgaggacctgatgcgcggggaatgcgtggtgcgcgcggggtca
cggtcatga
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