Acidiferrobacter thiooxydans: A9R16_004750
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Entry
A9R16_004750 CDS
T07877
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
aty
Acidiferrobacter thiooxydans
Brite
KEGG Orthology (KO) [BR:
aty00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aty03032
]
A9R16_004750
03036 Chromosome and associated proteins [BR:
aty03036
]
A9R16_004750
03400 DNA repair and recombination proteins [BR:
aty03400
]
A9R16_004750
DNA replication proteins [BR:
aty03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
A9R16_004750
Chromosome and associated proteins [BR:
aty03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
A9R16_004750
DNA repair and recombination proteins [BR:
aty03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
A9R16_004750
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
TetR_C_30
Motif
Other DBs
NCBI-ProteinID:
UEO00719
LinkDB
All DBs
Position
963357..963635
Genome browser
AA seq
92 aa
AA seq
DB search
MTKSELIQSLVASQPQLDQRDVELAVKGLLECMSNALQAGERIEVRGFGSFCLHHRPARL
GRNPKTGMSVQVPDRRVPHFKPGKELRERVDQ
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagtcggaactcattcagagcctcgtggcgagccagccgcaattggatcagcgg
gatgtggaactcgcggtcaagggtctcctggagtgcatgtcgaacgccctgcaggctggt
gagcggatcgaggtgcgcgggttcggcagcttctgtctgcaccatcgcccggcacggctc
gggcgcaacccgaagaccggcatgagcgtacaggtgccggatcggcgggtcccgcatttc
aagcccgggaaggaattgcgggagcgcgtcgaccagtaa
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