Acidiferrobacter thiooxydans: A9R16_005070
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Entry
A9R16_005070 CDS
T07877
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
aty
Acidiferrobacter thiooxydans
Pathway
aty03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aty00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A9R16_005070 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aty03019
]
A9R16_005070 (pcnB)
Enzymes [BR:
aty01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
A9R16_005070 (pcnB)
Messenger RNA biogenesis [BR:
aty03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
A9R16_005070 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
DUF6932
Motif
Other DBs
NCBI-ProteinID:
UEO00777
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All DBs
Position
1033043..1034311
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AA seq
422 aa
AA seq
DB search
MTDISKAPGIVDATSYGLIPGRISAQARQVIERLKDAGYTAYLVGGCVRDLILGEEPKDF
DVVTQARPEEIRQVFRNARLIGRRFRLAHVHFGREIIEVATYRAAPSADSEDDNGNVFGT
LEEDAFRRDFTVNALYYDPDEGLITDYVNGLHDLAHARLRVIGDPEARFREDPVRMLRAV
RFAAKLRLQLTEDGRRLLPVLGPLLQGVAPARLFEEVLKLFHTGNAAATYETLCEYRLFE
VLFPGVAAILGPHADRDSLLGRALANSDQRLSEGKPVTPAFLFAALLWEGVREEAMHSIA
EGAVPVEAWARAAEHVLREQLRVITIPKRFSVPMREIWGLQSRFERRAGRHAFRFLESKR
FRAAYDFLGLRVASGEAPAALFDWWTHFQEAAADEREAMVGALSAQGEKRPRKRRRRRAA
GG
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
ttgacagacatcagtaaggcgccggggatcgtggatgccacatcctacggcttgataccg
gggaggatcagtgcgcaggcccgtcaggtcatagagcggctgaaggacgcgggctatacc
gcttatctggtcggggggtgcgtgcgcgacctcatcctgggcgaggagcccaaggatttc
gacgtcgtgacccaggcgcggcccgaggagattcgtcaggtgttccgcaacgcgcgcctg
atcggccggcgcttccggttggcgcatgtccatttcggacgcgagatcatcgaggtcgcc
acttatcgcgccgcgccttctgccgactccgaggacgacaacggcaatgtcttcggcacc
ttggaggaggacgccttccgccgcgacttcacggtcaacgccctctattacgatcccgac
gagggcctcatcaccgattacgtcaacggtcttcatgacctcgcgcacgccaggctgcgg
gtcataggcgatccggaggcgcggtttcgggaggatccggtgcgcatgttgcgcgccgtg
cggttcgccgccaaattgcgtctccagttgactgaggacgggcgccggttgctgccggtt
ctggggccgcttttacagggtgtcgcgccggcgcggctcttcgaggaagtgctgaagctc
tttcataccggcaatgctgccgcgacttacgagacgctgtgcgagtaccggctgttcgag
gtgttgttcccgggggtggcggcgatcttgggtccgcatgccgatcgcgactcattgctc
gggcgagcgctcgccaatagcgatcagcgcctgtccgagggcaaacccgtgaccccggcc
ttcctgtttgccgcgctgctttgggagggtgtgcgcgaagaggccatgcacagcattgcc
gagggtgcggttccggtcgaggcgtgggcacgggccgccgagcatgtgctgcgcgaacag
ttgcgggtcatcacgatccccaagcgtttcagcgtgccgatgcgcgagatatggggtttg
caatcgcgcttcgagcggcgcgccgggcgccatgccttccgctttctggagagcaagaga
ttccgggcggcctatgattttctcgggctgcgtgtcgcctccggcgaggcgccggcggcg
ttgttcgactggtggacgcacttccaggaggccgccgccgacgagcgcgaggccatggtg
ggggccttgagcgcgcagggcgagaagcgtccgcgcaagcggcgtagacggcgtgccgcc
ggcggttga
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