Acidiferrobacter thiooxydans: A9R16_005520
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Entry
A9R16_005520 CDS
T07877
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
aty
Acidiferrobacter thiooxydans
Pathway
aty02024
Quorum sensing
aty03060
Protein export
aty03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
aty00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
A9R16_005520 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
A9R16_005520 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
A9R16_005520 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
aty02044
]
A9R16_005520 (ffh)
Enzymes [BR:
aty01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
A9R16_005520 (ffh)
Secretion system [BR:
aty02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
A9R16_005520 (ffh)
Eukaryotic Sec-SRP protein
A9R16_005520 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
CbiA
Zeta_toxin
cobW
ABC_tran
AAA_33
KTI12
AAA_18
AAA_30
APS_kinase
NACHT
T2SSE
nSTAND3
AAA_16
AAA_5
ParA
AAA_14
TsaE
Thymidylate_kin
AAA_31
Motif
Other DBs
NCBI-ProteinID:
UEO00860
LinkDB
All DBs
Position
1115133..1116488
Genome browser
AA seq
451 aa
AA seq
DB search
MFETLSNRLQGALRTLRGEARLTEKNIGEALREVRIALLEADVALSTTKTLIETIRTRAL
GQEVMATLNPSQAVVKIVHDTLVETMGAACDRLNLATRPPAVVLLAGLQGSGKTTSAGKL
ARLLRERERKKVALVSVDVYRPAAMDQLERLADEVGVVFYKGSPTESPEVIARRAVDLAR
REAMDVLIVDTAGRLHIDETMMNEVRALHAVTAPIETLFVVDSMTGQDAVHTAKAFDEAL
PLTGVILTKTDGDARGGAALSLRAVIGKPIKFLGTGEKTDGLEPFHPERLASRILGMGDV
LTLIEEAERKVDRQSAERLAEKFKKGKGFDLEDFREQMLQMERMGGMAGVLDKLPGMNDL
PAAARAQLQNHDTRRLVAIINSMTPQERRFPDTIRGSRKRRIAQGSGTGVPEVNRLLKQF
AQAQRMMKQMGKGGLKRMLAGMKGKMPGLPF
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaaacgctgagcaatcgtttgcagggcgcgctgcgcaccctgcgcggagaggcg
cgtctgaccgagaaaaacatcggtgaggcattgcgcgaggtgcggatcgcccttctggag
gcggatgtcgcgctgtcgaccacgaaaaccctgatcgagacgatacgcacgcgggcgctc
ggccaggaggtgatggccaccctgaacccgagccaggccgtggtcaagatcgtgcacgac
accctggtggagaccatgggggcggcatgtgaccggctgaatctggccacccgcccgccg
gcggtggtgctgctcgcgggtctgcagggttcggggaagaccacgagtgccggcaagctg
gcgcgtctgctgcgcgagcgtgagcgcaagaaggtggcgcttgtgagcgtcgacgtctat
cgtccggcggccatggaccagctcgagcgcctggcagacgaggtcggggtggtcttctat
aaagggtcgcccacggagtccccggaggtgatcgcgcgccgcgccgtggatctggcgcgg
cgcgaggccatggatgtcctcatcgtcgacaccgccgggcggctgcatatcgacgagacc
atgatgaacgaggtgcgcgccctgcatgccgtcaccgcgccgatagagaccctgtttgtg
gtcgacagcatgaccggtcaggatgccgtgcatacagccaaggccttcgatgaggccctg
ccgcttaccggcgtgattctcaccaagaccgacggcgatgcgcgcgggggggcggcgctc
tcgctgcgcgcggtgatcggcaaacccatcaagtttttgggtacgggcgagaagaccgac
gggctcgaacccttccacccggaacgtctggcctcacgcatcctgggtatgggtgatgtc
ctgacgctgatcgaagaggccgagcgtaaggtcgaccgccagagcgccgagcgtctggcc
gagaagttcaagaagggcaagggcttcgatctcgaggactttcgcgagcagatgctccag
atggagcgcatgggcggcatggccggggtgctcgacaagctcccgggcatgaacgatctc
ccggcggcggcacgcgcgcagctgcagaatcatgacacccgtcgcctcgtggccatcatc
aattccatgacgcctcaggagcgtcgtttccccgacaccatacgcggctcgcgcaagcgc
cgcattgcccagggttcgggcaccggtgtgccggaagtcaaccgcctgctcaagcaattc
gcgcaggcccagcgcatgatgaagcagatgggcaagggcggactcaaacgcatgttggcc
ggcatgaagggcaagatgccgggtttgccgttctag
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