Acidiferrobacter thiooxydans: A9R16_005875
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Entry
A9R16_005875 CDS
T07877
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
aty
Acidiferrobacter thiooxydans
Pathway
aty03030
DNA replication
aty03430
Mismatch repair
aty03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aty00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A9R16_005875 (dnaX)
03430 Mismatch repair
A9R16_005875 (dnaX)
03440 Homologous recombination
A9R16_005875 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aty03032
]
A9R16_005875 (dnaX)
03400 DNA repair and recombination proteins [BR:
aty03400
]
A9R16_005875 (dnaX)
Enzymes [BR:
aty01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A9R16_005875 (dnaX)
DNA replication proteins [BR:
aty03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
A9R16_005875 (dnaX)
DNA repair and recombination proteins [BR:
aty03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
A9R16_005875 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
DNA_pol3_tau_5
AAA
AAA_22
AAA_30
AAA_16
RuvB_N
AAA_14
AAA_5
AAA_assoc_2
AAA_18
AAA_19
SKI
nSTAND3
Mg_chelatase
Thymidylate_kin
AAA_7
TsaE
AAA_2
DUF2379
Motif
Other DBs
NCBI-ProteinID:
UEO00924
LinkDB
All DBs
Position
1181507..1183216
Genome browser
AA seq
569 aa
AA seq
DB search
MSYLVLARKWRPRTFPELLGQDSVVRALRFALSEGRVHHAYLFSGIRGVGKTTVARLLAK
ALNCEQGMGPDPCGKCSACQEIDAGRFADLIEVDAASRTKVDDTRELLDNVQYAPTRGRY
KVYLVDEVHMLSTHSFNALLKTLEEPPPHVKFILATTDPQKLPVTVLSRCQKFALRRLTD
TQIRDHMAAILREEGMEYDDEALVALSRAAEGSVRDALSLLDQAIAAGGGAVRAGAVRDM
LGAVAPDLVHRVIAALADGDGPTLLAAIDEAYSLGVAPEVFLGDIVRAWHEIAVAQVLNA
ESADAWTQGMAQRLPPEAVQLYYEIGCLGRRQMGAAPDPETGLRMTALRMLAFRPVSDVP
SKPQIVRPSRAPHDTRGSGGQEGAALAGQSPISPVSVRGAPIAAGDQRPADQRPADQRPA
DQRPADQRRSPVVVTETAPASGGSVLERLGLAGLMKHIAMNAVLDKSGDRVVVTVDPEAG
KLLNKERIDMLKDALCAYYKDPITVDVVVAPVTGTPAHLRREAEEAAQCRAREALAADPG
VAALKRTFNARVNEGSMRPRNSTAEERDL
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgagttatctggtgctggcgcgaaaatggcgtccgcgcacattcccagagcttttgggt
caggactccgtggtccgcgcgttgcgttttgccttgagcgaagggcgtgtccaccatgcc
tatcttttcagcggcatccgtggcgtcggcaagaccaccgtggcgcgtctccttgccaag
gctttgaactgtgagcaagggatggggcccgacccgtgcgggaagtgttcggcctgccag
gagatagacgccgggcgattcgccgatctcatcgaggtcgacgcggcctcgcgcaccaag
gtcgacgatacccgtgagcttctcgataatgtgcagtacgcaccgacccgcgggcgctac
aaggtgtacctcgtcgatgaggtccatatgctctcgacccatagcttcaatgcccttctc
aagaccctggaggagcccccgccacacgtcaaatttattctcgcaaccacggatccgcag
aaactcccggtcacggtcctatcacgttgccagaaattcgccctgcggcgcctgaccgat
acccagattcgcgaccatatggccgcgatcctgcgcgaagagggcatggaatacgatgat
gaggccctggtagcgctttcgcgcgctgccgaagggagtgttcgcgatgccctgagtcta
ctggaccaagcgatcgcggcggggggtggggcggtgcgggccggggcagtgcgcgacatg
ctcggggcggtggctccggaccttgtgcaccgggtgatcgcggcgctcgctgacggcgat
ggccccacactactggcggccatcgatgaggcctattcgctaggcgtggcgccagaggtg
tttttgggtgacatcgtgcgcgcctggcatgagatcgcagtcgctcaggtgctgaacgcg
gaatcggcggatgcgtggacgcaggggatggcgcaacggctacctcccgaggccgtgcag
ctctattacgagattgggtgcttagggcgtcgtcagatgggtgcggcccccgatcccgag
accgggttgcgcatgacggccttgcgaatgttggcgttccgaccggtcagcgatgtgccg
agtaagccgcagattgtgaggccaagccgtgcgccgcacgatacgcgcgggagtggtggc
caggagggcgccgcgctagcgggccaatcgccaataagtcccgtgagcgtacggggcgcc
ccgattgccgctggcgaccagaggcccgcagaccagaggcccgcagaccagaggcccgca
gaccagaggcccgcagaccagaggcggtccccggtggtggttacggagaccgcccccgcc
tcagggggttcggttctagagcggctgggtctggccggccttatgaagcatattgccatg
aacgccgtgttggataagagtggcgatcgggtggtggtaaccgtggatccggaggccggc
aagctcctgaacaaagagcggatcgatatgttaaaggacgcgctttgcgcctattataaa
gaccctatcaccgtggatgtggtggtggctcctgtgaccggcacaccggcccatctacgc
cgtgaggctgaagaggccgcgcagtgtcgggcacgcgaggcgctcgccgctgatccaggg
gtagcggccctgaagcggacgttcaatgcccgtgtgaacgagggttccatgcgaccgcgc
aatagcacagcagaggagcgagatttatga
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