Acidiferrobacter thiooxydans: A9R16_008340
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Entry
A9R16_008340 CDS
T07877
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
aty
Acidiferrobacter thiooxydans
Pathway
aty00300
Lysine biosynthesis
aty01100
Metabolic pathways
aty01120
Microbial metabolism in diverse environments
aty01230
Biosynthesis of amino acids
Module
aty_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
aty00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
A9R16_008340 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
aty01002
]
A9R16_008340 (dapE)
Enzymes [BR:
aty01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
A9R16_008340 (dapE)
Peptidases and inhibitors [BR:
aty01002
]
Metallo peptidases
Family M20
A9R16_008340 (dapE)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Motif
Other DBs
NCBI-ProteinID:
UEN98455
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Position
complement(1728423..1729553)
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AA seq
376 aa
AA seq
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MDPTLALAMELIGRASVTPDDAGCQAHIAGLLQAAGFHTESLVFGEVTNLWARHGTAAPL
VVFLGHTDVVPPGPSADWTTPPFVPTIRDGMLYGRGAADMKGAVAAFVQALIGFVGRHPR
HPGSVGLLLTSDEEGPARDGTAQVLKTLAARGESITYCLVGEPSCQVALGDTVKHGRRGS
LNGDLIIHGVQGHVAYPERADNPIARFAPALQALVSITWDEGSADFPPTRLQFSNIHAGT
GADNVIPGTLQALFNLRYGPATPAPVLRARIEEVLAAHNLRYTLHWRLSGEPFLSHDGPL
RAALAASIQAETGREPQYSTSGGTSDGRFVAPFGAQVLEFGPLNGSIHKVNEAVSVDDLV
RLTRIYQGTLERIWAL
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggatccgacactggcgttggccatggaactgatcgggcgcgcatcggtcacgccggat
gacgccggctgtcaggcgcatattgccggattgttgcaggcggcgggctttcatacggaa
tcgctggtgttcggcgaggtcaccaacctctgggcgcgtcatggcacggccgccccgctc
gtcgtatttctcgggcacaccgatgtggtcccgcccggcccgtccgccgactggaccacg
ccgccttttgtgccgaccatccgtgatggcatgctctatgggcgtggggcggcggacatg
aaaggcgcagtggcggcgttcgtacaggccttgatcggctttgtgggccgccacccccga
cacccgggctccgtgggcttgctgcttacctccgatgaggagggtcccgcccgtgacggc
accgcccaggtcctaaagaccctggcggcacgcggcgaatccatcacgtactgtctcgtg
ggcgagccctcgtgccaggtcgcgctcggcgataccgtaaagcacggccggcgagggtcc
ctgaatggcgatctgataatccatggtgtccagggtcacgtggcctacccggaacgcgcc
gacaaccccatcgcacgcttcgcgccggccttgcaggcgctggtgtcgatcacctgggac
gaggggtccgcggatttcccgccgacacgcctccagttctccaatatccacgccggcacc
ggcgcggataatgtcatcccgggaacgctgcaggcgctcttcaatctgcgctatgggcca
gcgacaccggcgcccgtactgcgcgcgcgcatcgaagaggtgctcgccgcccacaatctc
cgctacacccttcattggcggctctccggggaaccgtttttgagccatgatggtccactc
agggcggcgctggccgcgagcatccaggccgagaccggccgggaaccgcaatactcgacg
agcggagggacgtccgatggtcggttcgttgcgccctttggtgcccaagttcttgaattc
gggccgctcaacggctctattcataaagtgaacgaagcggtttccgtggacgatctcgtg
cgcctgacccggatctatcagggaacgctggagcggatctgggcgctttaa
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