Acidiferrobacter thiooxydans: A9R16_008495
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Entry
A9R16_008495 CDS
T07877
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
aty
Acidiferrobacter thiooxydans
Pathway
aty03410
Base excision repair
aty03430
Mismatch repair
aty03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aty00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A9R16_008495 (recJ)
03430 Mismatch repair
A9R16_008495 (recJ)
03440 Homologous recombination
A9R16_008495 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aty03400
]
A9R16_008495 (recJ)
DNA repair and recombination proteins [BR:
aty03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
A9R16_008495 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
A9R16_008495 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
A9R16_008495 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
UEN98484
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Position
1756824..1758500
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AA seq
558 aa
AA seq
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MTARSAPTAIVEAVLDRLYAARGVGDRAAETRGLAALAVPDTLSGLEQATGALAEAIARG
ERILVIGDYDADGATGTALAVRGLRRLGARDVHYLIPDRAREGYGLSAAIVARAATLEPQ
WILTVDNGINSLEGARAACDRGLRLIITDHHLPGPTLPEAVAIVNPNQPADRFPSKALAG
VGVVLYVLIALRRRLAADHVSLADLLDLVALGTIADCVPLDANNRVLVREGLRRMNAGRA
CAGIEALLLVSGRRPGRIYAQDLGFQIGPRLNAAGRLADMSVGVRCLLTDDRAEALALAR
ELDALNRERREREAQMQAEASAHLAVAVEADTLSAGICLMEPHWHPGVVGILAGRLKDAY
KRPAIVFAPADDGSLRGSGRSVPTLNLRDTLAAIGERHAGLIRQFGGHAAAAGLTVAEDD
YPRFAAAFADEVERRIGRGPFVDARGDGVLQVEELTLALASAIRAGGPWGNGFPEPLFEG
VFGVVEAAVVKEAHLRLRLAMDGRDEPLKAVAFRCKQAPPIGSSIAVRYYLGVDDFGGRE
TLCLYVAEWSAESFPIQK
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgcgatcggcgccgacggctatcgtagaggcggtcctcgatcgtctctatgcg
gcccgcggggtcggagatcgcgccgcggagacccgtgggcttgcggcacttgccgtgccc
gataccttgagcggactcgagcaggccaccggtgccttggcagaggccatagcgcggggt
gaacgcatcctcgtcatcggtgactatgatgccgatggcgccaccggcaccgcccttgcg
gtgcgcgggttacggcgcctgggcgcgcgcgatgtccattatctgatcccggaccgggcg
cgcgagggttatggtttgagtgccgccatcgtggcgcgcgccgcaaccctggagccacag
tggatcctgacggtcgacaacggcatcaacagcctggagggggcacgcgcggcgtgcgat
cgcggtttgcgtcttatcatcaccgaccaccatctgcccggcccgacgctgcccgaggcg
gtcgccatcgtcaatcccaaccagcccgcggatcgctttccgagtaaggccctggccggg
gtcggtgtggtgctctatgtcctgatcgcgctgcgtcggcgactggccgccgaccatgtg
tcgcttgccgatctcctggacctcgtggcgctcggcaccatcgccgattgcgtcccgctc
gatgccaataatcgcgtgctggtgcgcgaggggctgcggcgcatgaacgccggacgcgcc
tgtgccggtatcgaggccttgctgcttgtaagcggcagacggcccgggcggatctatgcc
caggacctcggtttccagatcgggccgcggttgaacgccgccgggcggttggccgacatg
agtgtgggtgtgcgctgcctgctcacggatgatcgcgccgaggccttggcgctggcgcgc
gaactcgatgccctgaaccgcgaacggcgcgagcgcgaagcgcagatgcaggccgaggcc
agcgcgcatctggcggtggcagtcgaggccgacaccttgagtgccgggatttgtctcatg
gagccgcactggcacccgggtgtcgtcgggattctcgccgggcgcctgaaagacgcctac
aagcggccagcgatcgtattcgcgcccgccgatgacggttctctgcgaggctctggccgc
agtgtgccgacgctcaacctgcgcgatacgctggcggccatcggcgaacgccatgcgggt
ctgatccgccagttcggtggacacgccgcggccgccggccttacggtcgccgaagacgat
tacccgcgctttgccgcggcgttcgcagacgaggtcgagcggcgcatagggcgcggcccg
ttcgtcgacgcgcgcggcgatggcgtattgcaggtggaggaattgacgctggcgctggca
tcggcaatccgtgccggtggtccgtggggcaatggtttccctgaaccgctcttcgagggg
gtttttggggtggtggaggcggcggtggtgaaggaggcacatctgcgcctgcggctcgcc
atggacggtcgtgacgaacccctgaaggccgtggcattccgttgcaagcaggcgccgcct
atcggcagttctattgccgtgcgctactacctcggggtcgatgacttcggcggccgcgag
accctgtgcctgtacgttgcagaatggtccgccgagtcctttccaattcagaaatga
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