Acidiferrobacter thiooxydans: A9R16_011365
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Entry
A9R16_011365 CDS
T07877
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
aty
Acidiferrobacter thiooxydans
Pathway
aty02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
aty00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
A9R16_011365
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
aty02022
]
A9R16_011365
02035 Bacterial motility proteins [BR:
aty02035
]
A9R16_011365
Two-component system [BR:
aty02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
A9R16_011365
Bacterial motility proteins [BR:
aty02035
]
Pilus system
Twitching motility proteins
A9R16_011365
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_16
AAA_5
HTH_30
AAA
AAA_19
Motif
Other DBs
NCBI-ProteinID:
UEN99018
LinkDB
All DBs
Position
2382964..2384328
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AA seq
454 aa
AA seq
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MTIPQVLIIDDEADIRALLELTLGRMNIETRSAGDVASAFALLEEYRFDLCLTDMRLPDG
DGLAIVRHIEEHHRGLPVAVITAHGSMETAIAALKGGAFDFVCKPLNINELRALVRSALN
LSKQAPSDGASAAAKLLGDSQAIREVRALIERLARGQAPVYISGESGTGKELAARLIHDL
GPRAGRPFVAVNCGAIPEQLMESEFFGHKKGSFTGAFNDKDGLFKTASGGTLFLDEVGDL
PVPMQVKLLRAIQEKAVRPVGSQQEVAVDVRILSATHKNLHDLVRTGAFRQDLYYRLNVI
ELVIPPLRERAGDIPALAAHLAAKLSMGRPLPLTPAALAALKRYAFPGNVRELENIMERA
LTLCESGEIDVADLRLPGHDAPGLSGKVAAPEASPFNASDYTGEQSLEEHLVQVERAAIE
KALRDTNQNKTAAARELGITFRALRYKLEKLGIE
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgacgatcccccaagtccttatcatcgatgacgaagccgatatccgcgcgctgctcgag
ctcacgctcggccgcatgaatatcgagacccgctcggccggcgacgtggcctcggccttc
gcactgctcgaggagtaccggttcgacctgtgcctcacggatatgcgcctgccggacggt
gacggcctggccatcgtgcgccatatcgaggagcatcatcgcgggcttccggtggcggtc
atcaccgcccacgggagcatggagacggccatcgcggcgttgaagggcggggccttcgac
ttcgtatgtaaacccctcaatatcaatgagttacgggcactcgtacgcagtgccctgaac
ctctcgaaacaggcgccgagcgacggcgcgagcgccgccgccaaacttctcggtgattcc
caggccatccgcgaggtccgcgccctcatcgagcgcctggcgcgcggacaggcgcccgta
tacatctccggggaatcgggcaccggcaaggaactcgccgcgcgcctcatccatgacctc
ggaccccgtgccggccgcccgttcgtggccgtcaactgcggggcgatacccgagcagctg
atggaaagcgagttcttcggtcacaagaagggcagcttcaccggcgccttcaacgacaag
gacgggcttttcaagaccgcgagcgggggcactttgttcctggacgaggtcggcgacctg
ccggtccccatgcaggtgaagcttctgcgcgccatccaggagaaggcggtgcgtccggtc
ggcagccagcaggaagtggcggtggacgtgcgcatcctgtcggccacacacaaaaacctc
cacgacctcgtacgcaccggcgcgttccgccaggacctctactatcgcctgaacgtcatt
gagctcgtgatcccgccgctgcgcgaacgcgccggcgacatcccggcgctcgcggcgcat
ctcgccgccaaactgagtatgggtcgccccttgccgctcacccccgccgccctggcggcg
ctcaagagatacgcattccccggcaacgtccgcgaactcgagaacatcatggagcgggcg
ctgaccttgtgcgagagcggcgagatcgatgtggcggacctgcgtctacccggacacgat
gccccggggctatccggcaaagtcgccgcgccggaggcctcgcccttcaatgccagcgat
tacacgggcgaacaatcactcgaggaacacctggtccaggtcgaacgcgcggcgatcgaa
aaggccctgcgcgacaccaatcagaataagaccgctgccgcccgcgagctcggcatcacc
ttccgcgccctgcgctacaagctcgaaaagctcggcatcgaatag
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