Acidiferrobacter thiooxydans: A9R16_011835
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Entry
A9R16_011835 CDS
T07877
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
aty
Acidiferrobacter thiooxydans
Brite
KEGG Orthology (KO) [BR:
aty00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aty03016
]
A9R16_011835 (truB)
Enzymes [BR:
aty01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
A9R16_011835 (truB)
Transfer RNA biogenesis [BR:
aty03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
A9R16_011835 (truB)
Prokaryotic type
A9R16_011835 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
Motif
Other DBs
NCBI-ProteinID:
UEN99107
LinkDB
All DBs
Position
complement(2491073..2491984)
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AA seq
303 aa
AA seq
DB search
MKVPCVRRDGLLVLDKPPGLSSTQALAQARHRLRACKGGHTGTLDPLATGVLVLCFGEAT
KAASFLVDSDKRYRVAITLGVSTTTYDREGEVVARRPVTVSDAALRAAVGRFIGRIDQTP
PRFSAIKQDGRPFYERARRGDEARPASRSVVVTGIEIIDREDMMLTLDVACGKGFYVRSL
AHDLGEALGCGGHVAELRRLAVGRFTLDQAVALTDVGPDTALLESDAALTGLPSVVLPGF
LARAVMRGQGVHIGGREQEGWVRLYDDSGVFLGVGWSAAAGEIRPKRLWIGAPGHVEPMD
ARG
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgaaggttccgtgcgtgcgccgtgacggtctgctggtcctcgacaagccgcccggcctt
agctccacgcaggccctggcgcaggcgcgtcaccgtctgcgcgcctgcaagggcgggcat
acggggaccctcgacccgttggcgaccggtgtgctggtactgtgttttggtgaggccacc
aaggccgcctcgtttctggtcgacagcgataagcgttaccgggtcgccattacgctcggg
gtgagcaccacaacctatgatcgtgaaggtgaggttgtggcgcgccgcccggtgacggtg
tccgatgccgccttgcgcgcggccgtgggtcgtttcatcggtcgcatcgatcagacaccc
ccccgattttcggcgatcaagcaggacggccggcccttttacgagcgagcccgccgcggt
gacgaggcgcggccggcgagccgcagcgtggtcgtgaccggcatcgagatcatcgatcgc
gaggatatgatgctcacgctcgacgtcgcctgcggcaagggtttctatgtgcgcagtctg
gcccacgatctcggcgaggccctgggttgcggcgggcatgtcgcggagttgcgtaggctc
gcggtcgggcgttttaccctcgatcaggccgtggcactcacggatgtcggccccgatacc
gccttgctcgagagtgacgccgcgctcaccggcctgccgtcggtggtgctgccgggattc
ctggcgcgtgccgtcatgcgcgggcaaggcgtgcacatcggtggccgggaacaggagggt
tgggtccgtttgtatgacgattcgggggtgttcctcggtgttgggtggtcggcggcggcc
ggggagatccgtcccaagcgcctatggatcggggcgcctgggcatgttgagcccatggac
gcacgcggttag
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